RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 KRI1Q8N9T8 703 aaKnown RBP13.2□□□□□ -0.3
COLCA1-202ENST00000526150 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 EXOC4Q96A65 974 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 KIF2CQ99661 725 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 ZHX3Q9H4I2 956 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
COLCA1-202ENST00000526150 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-202ENST00000526150 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 DCHS1Q96JQ0 3298 aa13.2□□□□□ -0.3
COLCA1-202ENST00000526150 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 MYBPHLA2RUH7 354 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 ARNTLO00327 626 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 PIRO00625 290 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 TDGF1P13385 188 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 GJB2P29033 226 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 TAF6P49848 677 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
COLCA1-202ENST00000526150 GTF2BQ00403 316 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 AMPD2Q01433 879 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 SIM2Q14190 667 aaPredicted RBP13.19□□□□□ -0.3
COLCA1-202ENST00000526150 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 SLC39A12Q504Y0 691 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 PRR23BQ6ZRT6 265 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 DCP1BQ8IZD4 617 aaKnown RBP13.19□□□□□ -0.3
COLCA1-202ENST00000526150 ATAD1Q8NBU5 361 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 TASP1Q9H6P5 420 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
COLCA1-202ENST00000526150 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 SOBPA7XYQ1 873 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 SPECC1L-ADORA2AF8WAN1 911 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 FAM189A1O60320 539 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 IL18RAPO95256 599 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 VNN2O95498 520 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 DDX6P26196 483 aaKnown RBP eCLIP13.18□□□□□ -0.3
COLCA1-202ENST00000526150 HOXA6P31267 233 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 CTHP32929 405 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 DDIT3P35638 169 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 PNPLA4P41247 253 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
COLCA1-202ENST00000526150 GAREM2Q75VX8 874 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
COLCA1-202ENST00000526150 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
COLCA1-202ENST00000526150 RAD54LQ92698 747 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 HVCN1Q96D96 273 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 TMX3Q96JJ7 454 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
COLCA1-202ENST00000526150 CRISPLD1Q9H336 500 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 ST6GALNAC4Q9H4F1 302 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 AGO2Q9UKV8 859 aaKnown RBP13.18□□□□□ -0.3
COLCA1-202ENST00000526150 EXOC7Q9UPT5 735 aa13.18□□□□□ -0.3
COLCA1-202ENST00000526150 NUP210Q8TEM1 1887 aaPredicted RBP13.17□□□□□ -0.3
COLCA1-202ENST00000526150 DMXL1Q9Y485 3027 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 COL4A2P08572 1712 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 CYB561D2O14569 222 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 ATG13O75143 517 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 PLCG1P19174 1290 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 AVPR1AP37288 418 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 GUCY2FP51841 1108 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 SATB1Q01826 763 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 MCM6Q14566 821 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 ITPRIPL2Q3MIP1 535 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 SV2CQ496J9 727 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 CEP68Q76N32 757 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
COLCA1-202ENST00000526150 PYM1Q9BRP8 204 aaKnown RBP13.17□□□□□ -0.3
COLCA1-202ENST00000526150 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 KIF9Q9HAQ2 790 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 DPP3Q9NY33 737 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
COLCA1-202ENST00000526150 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
COLCA1-202ENST00000526150 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
COLCA1-202ENST00000526150 NFICP08651 508 aa13.16□□□□□ -0.3
COLCA1-202ENST00000526150 NMT1P30419 496 aaKnown RBP13.16□□□□□ -0.3
COLCA1-202ENST00000526150 TXLNAP40222 546 aa13.16□□□□□ -0.3
COLCA1-202ENST00000526150 ACOT2P49753 483 aa13.16□□□□□ -0.3
COLCA1-202ENST00000526150 TSPY1Q01534 308 aa13.16□□□□□ -0.3
COLCA1-202ENST00000526150 SPEM2Q0P670 501 aa13.16□□□□□ -0.3
COLCA1-202ENST00000526150 BFSP1Q12934 665 aa13.16□□□□□ -0.3
COLCA1-202ENST00000526150 NFE2Q16621 373 aaPredicted RBP13.16□□□□□ -0.3
COLCA1-202ENST00000526150 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms