RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TRPV4Q9HBA0 871 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 FBRSL1Q9HCM7 1045 aaKnown RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 TRPV5Q9NQA5 729 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 UBQLN1Q9UMX0 589 aaKnown RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 MAGED2Q9UNF1 606 aaPredicted RBP7.14□□□□□ -1.27
CD44-221ENST00000526000 WDR87Q6ZQQ6 2873 aa7.14□□□□□ -1.27
CD44-221ENST00000526000 TRIP11Q15643 1979 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 DMDP11532 3685 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 ANTXRLA6NF34 631 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 OTOL1A6NHN0 477 aaPredicted RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 OR6C75A6NL08 312 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 TISP43B9A030 160 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 ANKRD63C9JTQ0 380 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 CYB561D2O14569 222 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 FAM13AO94988 1023 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 EGFP01133 1207 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 NFICP08651 508 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 CCDC192P0DO97 292 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 LRPAP1P30533 357 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 GALK1P51570 392 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 SLC12A3P55017 1021 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 LILRA4P59901 499 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 ENOX2Q16206 610 aaKnown RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 ITPRIPL2Q3MIP1 535 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 ARHGAP29Q52LW3 1261 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 DGKKQ5KSL6 1271 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 WSCD1Q658N2 575 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 TXNDC8Q6A555 127 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 SCARA3Q6AZY7 606 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 TCEAL6Q6IPX3 200 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 MAMSTRQ6ZN01 415 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 GPBP1Q86WP2 473 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 TTC30AQ86WT1 665 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 RALGPS2Q86X27 583 aaPredicted RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 SYT2Q8N9I0 419 aaPredicted RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 LEMD2Q8NC56 503 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 BEST2Q8NFU1 509 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 BPIFB1Q8TDL5 484 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 NOC3LQ8WTT2 800 aaKnown RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 SPIRE2Q8WWL2 714 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 TCEAL3Q969E4 200 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 PSMG2Q969U7 264 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 E2F7Q96AV8 911 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 CHFRQ96EP1 664 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 FAM84AQ96KN4 292 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 HHIPQ96QV1 700 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 CYP2S1Q96SQ9 504 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 PYM1Q9BRP8 204 aaKnown RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 MSTO1Q9BUK6 570 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 TASP1Q9H6P5 420 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 PLEKHA5Q9HAU0 1116 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 THG1LQ9NWX6 298 aaKnown RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 ABI2Q9NYB9 513 aaPredicted RBP7.13□□□□□ -1.27
CD44-221ENST00000526000 SLC8A2Q9UPR5 921 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 CCL26Q9Y258 94 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 ATG2BQ96BY7 2078 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 MIA3Q5JRA6 1907 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 ARID2Q68CP9 1835 aa7.13□□□□□ -1.27
CD44-221ENST00000526000 DCHS1Q96JQ0 3298 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 K7ENM7 598 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 GIPC1O14908 333 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 HNRNPDLO14979 420 aaKnown RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 OGTO15294 1046 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 PRPF40AO75400 957 aaKnown RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 RPP40O75818 363 aaKnown RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 KRT18P05783 430 aaKnown RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 ODC1P11926 461 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 ATF6P18850 670 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 SPINK2P20155 84 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 GUCY2CP25092 1073 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 TRAPPC10P48553 1259 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 FCHO2Q0JRZ9 810 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 ORC2Q13416 577 aaPredicted RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 RUNX3Q13761 415 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 MCM6Q14566 821 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 VEPH1Q14D04 833 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 DDR2Q16832 855 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 ZC2HC1CQ53FD0 456 aaPredicted RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 STPG1Q5TH74 334 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 SPATA1Q5VX52 437 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 C9orf57Q5W0N0 161 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 FSTL4Q6MZW2 842 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 SLC39A4Q6P5W5 647 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 ZPBP2Q6X784 338 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 ITIH5Q86UX2 942 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 WDR5BQ86VZ2 330 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 METTL23Q86XA0 190 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 THEM5Q8N1Q8 247 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 LRRC15Q8TF66 581 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 USP13Q92995 863 aaPredicted RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 ZSCAN31Q96LW9 406 aaPredicted RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 GCNAQ96QF7 691 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 KIF2CQ99661 725 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 REEP2Q9BRK0 252 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 LLPHQ9BRT6 129 aaKnown RBP7.12□□□□□ -1.27
CD44-221ENST00000526000 PI4K2AQ9BTU6 479 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 C17orf75Q9HAS0 396 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 IL21Q9HBE4 155 aa7.12□□□□□ -1.27
CD44-221ENST00000526000 TRPC7Q9HCX4 862 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms