RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 VITQ6UXI7 678 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 ELMOD1Q8N336 334 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 CXorf38Q8TB03 319 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 BLZF1Q9H2G9 400 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 ASAH2Q9NR71 780 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 RBAKQ9NYW8 714 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-210ENST00000525990 PCDHA7Q9UN72 937 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 SIT1Q9Y3P8 196 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 KPNA7A9QM74 516 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 IL18RAPO95256 599 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 GARTP22102 1010 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 NBL1P41271 181 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 ASIC1P78348 528 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 POSTNQ15063 836 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 CYP4A22Q5TCH4 519 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 TPRG1Q6ZUI0 275 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 GAREM2Q75VX8 874 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 OR5B17Q8NGF7 314 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 SEPT5Q99719 369 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 MKNK1Q9BUB5 465 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 MTMR12Q9C0I1 747 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 ZCWPW1Q9H0M4 648 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
SSBP3-210ENST00000525990 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
SSBP3-210ENST00000525990 KANSL1LA0AUZ9 987 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 PRR23AA6NEV1 266 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 PROB1E7EW31 1015 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 ZNF197O14709 1029 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 EXTL3O43909 919 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
SSBP3-210ENST00000525990 TARSP26639 723 aaKnown RBP13□□□□□ -0.33
SSBP3-210ENST00000525990 GPR15P49685 360 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 EPHB3P54753 998 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 CYP4F8P98187 520 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 BFSP1Q12934 665 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 SV2CQ496J9 727 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 EPM2AIP1Q7L775 607 aaPredicted RBP13□□□□□ -0.33
SSBP3-210ENST00000525990 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
SSBP3-210ENST00000525990 OSTM1Q86WC4 334 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 NELFCDQ8IXH7 590 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 MAML2Q8IZL2 1156 aaPredicted RBP13□□□□□ -0.33
SSBP3-210ENST00000525990 GPD1LQ8N335 351 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 GIPC2Q8TF65 315 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 SMARCD2Q92925 531 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 SLITRK6Q9H5Y7 841 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 ZFP14Q9HCL3 533 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 ABI2Q9NYB9 513 aaPredicted RBP13□□□□□ -0.33
SSBP3-210ENST00000525990 MAFFQ9ULX9 164 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 R4GN57 208 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 DMDP11532 3685 aa13□□□□□ -0.33
SSBP3-210ENST00000525990 VPS13AQ96RL7 3174 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 CLIC2O15247 247 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 TGFB1I1O43294 461 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 MICAL2O94851 1124 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 KRT19P08727 400 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 AFMP43652 599 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 ALDH1A3P47895 512 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 POU5F1Q01860 360 aaKnown RBP12.99□□□□□ -0.33
SSBP3-210ENST00000525990 EHHADHQ08426 723 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 PLD1Q13393 1074 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 CUL4BQ13620 913 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 ALCAMQ13740 583 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 FAM26FQ5R3K3 315 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 SDHAF4Q5VUM1 108 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 RESP18Q5W5W9 173 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 METTL23Q86XA0 190 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 CSGALNACT2Q8N6G5 542 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 PSMG2Q969U7 264 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 OXCT2Q9BYC2 517 aaPredicted RBP12.99□□□□□ -0.33
SSBP3-210ENST00000525990 IRF2BPLQ9H1B7 796 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 BRD9Q9H8M2 597 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 IL21Q9HBE4 155 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 LTB4R2Q9NPC1 389 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 HSPBP1Q9NZL4 362 aa12.99□□□□□ -0.33
SSBP3-210ENST00000525990 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms