RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 LRRC63Q05C16 580 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 CAMK4Q16566 473 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 SOWAHAQ2M3V2 549 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 FOXR2Q6PJQ5 311 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 RNF19BQ6ZMZ0 732 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
CTSB-209ENST00000525315 FAM186BQ8IYM0 893 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 THEM5Q8N1Q8 247 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 PDCL2Q8N4E4 241 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 SMG7Q92540 1137 aaKnown RBP13.92□□□□□ -0.18
CTSB-209ENST00000525315 GBP4Q96PP9 640 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 TSG101Q99816 390 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 MKNK1Q9BUB5 465 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
CTSB-209ENST00000525315 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 SNX9Q9Y5X1 595 aa13.92□□□□□ -0.18
CTSB-209ENST00000525315 PSMA7O14818 248 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 VNN1O95497 513 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 OR4Q2P0C623 313 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 ELF1P32519 619 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 MYL6P60660 151 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 STIM1Q13586 685 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 ZACNQ401N2 412 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 TDRD10Q5VZ19 366 aaKnown RBP13.91□□□□□ -0.18
CTSB-209ENST00000525315 LRRTM3Q86VH5 581 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 OR10T2Q8NGX3 314 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 SLC7A14Q8TBB6 771 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 TMEM209Q96SK2 561 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 ACBD6Q9BR61 282 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 ZCWPW1Q9H0M4 648 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 XYLT2Q9H1B5 865 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 VRTNQ9H8Y1 702 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 CYP4F11Q9HBI6 524 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 USTQ9Y2C2 406 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
CTSB-209ENST00000525315 TRIM49BA6NDI0 452 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 BIN1O00499 593 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 PHACTR2O75167 634 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 XYLBO75191 536 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 CPB1P15086 417 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 SSTR3P32745 418 aaPredicted RBP13.9□□□□□ -0.18
CTSB-209ENST00000525315 LHX1P48742 406 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 SMARCB1Q12824 385 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 TRPC3Q13507 836 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 SV2AQ7L0J3 742 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 OSTM1Q86WC4 334 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 SYAP1Q96A49 352 aaPredicted RBP13.9□□□□□ -0.18
CTSB-209ENST00000525315 PIDD1Q9HB75 910 aa13.9□□□□□ -0.18
CTSB-209ENST00000525315 MTMR11A4FU01 709 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 PRRG1O14668 218 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 CCL16O15467 120 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 TACC1O75410 805 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 KRT13P13646 458 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 GTF2H1P32780 548 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 PPP3CAQ08209 521 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 DUSP4Q13115 394 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 WDR72Q3MJ13 1102 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 TTI2Q6NXR4 508 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 DCP1BQ8IZD4 617 aaKnown RBP13.89□□□□□ -0.19
CTSB-209ENST00000525315 ZDHHC14Q8IZN3 488 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 KBTBD7Q8WVZ9 684 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 EEF2KMTQ96G04 330 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
CTSB-209ENST00000525315 CRISPLD1Q9H336 500 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 AVENQ9NQS1 362 aaPredicted RBP13.89□□□□□ -0.19
CTSB-209ENST00000525315 DDX43Q9NXZ2 648 aaKnown RBP13.89□□□□□ -0.19
CTSB-209ENST00000525315 DNMT3BQ9UBC3 853 aaKnown RBP13.89□□□□□ -0.19
CTSB-209ENST00000525315 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 PTPRDP23468 1912 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 CLUHO75153 1309 aa13.89□□□□□ -0.19
CTSB-209ENST00000525315 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 C2CD4DB7Z1M9 353 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 SLC16A3O15427 465 aaKnown RBP13.88□□□□□ -0.19
CTSB-209ENST00000525315 LRG1P02750 347 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
CTSB-209ENST00000525315 PTPN2P17706 415 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 WARSP23381 471 aaKnown RBP13.88□□□□□ -0.19
CTSB-209ENST00000525315 MYL7Q01449 175 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 BIRC3Q13489 604 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 NCOA4Q13772 614 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 SLC39A12Q504Y0 691 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 OTOP3Q7RTS5 596 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 GRASPQ7Z6J2 395 aaPredicted RBP13.88□□□□□ -0.19
CTSB-209ENST00000525315 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 ADGRF2Q8IZF7 708 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 ATAD1Q8NBU5 361 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 GPT2Q8TD30 523 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 C2orf15Q8WU43 125 aaKnown RBP13.88□□□□□ -0.19
CTSB-209ENST00000525315 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 TAF4BQ92750 862 aa13.88□□□□□ -0.19
CTSB-209ENST00000525315 KHSRPQ92945 711 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTSB-209ENST00000525315 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms