RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 IGSF21Q96ID5 467 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 HMGXB4Q9UGU5 601 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 CNTN6Q9UQ52 1028 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 TIMM13Q9Y5L4 95 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 GRXCR1A8MXD5 290 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 A8MXQ7 604 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 SYN3O14994 580 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 CYP26A1O43174 497 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 NRDCO43847 1150 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 CYP11A1P05108 521 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 FAM163BP0C2L3 166 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 TYMPP19971 482 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 BMP8BP34820 402 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 GNL1P36915 607 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 ZNF132P52740 706 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 BPIFB4P59827 614 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 KLHL30Q0D2K2 578 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 TDRD12Q587J7 1177 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 UNC93AQ86WB7 457 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 SPATA18Q8TC71 538 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 NT5C1AQ9BXI3 368 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
TSPAN4-213ENST00000524895 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 SERPING1P05155 500 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 TKTP29401 623 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 CTNNB1P35222 781 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 CLCN1P35523 988 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 LHX1P48742 406 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 PDE6CP51160 858 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 YWHAHQ04917 246 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 PTK2Q05397 1052 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 ORC1Q13415 861 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 MEA1Q16626 185 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 OVOS1Q6IE37 1185 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 IRF2BP2Q7Z5L9 587 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 OSTM1Q86WC4 334 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 CCDC112Q8NEF3 446 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 TMEM176AQ96HP8 235 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 BAG1Q99933 345 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 ELOVL4Q9GZR5 314 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 PUF60Q9UHX1 559 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 STXBP5LQ9Y2K9 1186 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 BZW2Q9Y6E2 419 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 CEP290O15078 2479 aa16.89■□□□□ 0.29
TSPAN4-213ENST00000524895 TNRC18O15417 2968 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 GABRDO14764 452 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 CA3P07451 260 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 PAEPP09466 180 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 LINC00271P0C7V0 271 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 SKILP12757 684 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 MYOGP15173 224 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 CD19P15391 556 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 FGFR3P22607 806 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 GNA15P30679 374 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 PRKCIP41743 596 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 RAD23BP54727 409 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 MLLT1Q03111 559 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 WDR59Q6PJI9 974 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 CEP57Q86XR8 500 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 TDHQ8IZJ6 230 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 THEM5Q8N1Q8 247 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 SLC4A11Q8NBS3 891 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 TNIP3Q96KP6 325 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
TSPAN4-213ENST00000524895 HCRTO43612 131 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 FGF18O76093 207 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 PDGFRBP09619 1106 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 CYP11B1P15538 503 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 LMO2P25791 158 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 PCSK1P29120 753 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 CDK17Q00537 523 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 KRT17Q04695 432 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 RAB30Q15771 203 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 USP41Q3LFD5 358 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 HGSNATQ68CP4 663 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 ACOT1Q86TX2 421 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 EPS8L1Q8TE68 723 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 B3GALT6Q96L58 329 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 TTPALQ9BTX7 342 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 HERC2P3Q9BVR0 1158 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 DPEP3Q9H4B8 488 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 DEF6Q9H4E7 631 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 HAUS4Q9H6D7 363 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms