RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.41
CSTF3-205ENST00000524775 BEGAINQ9BUH8 593 aa12.52□□□□□ -0.41
CSTF3-205ENST00000524775 LHX5Q9H2C1 402 aa12.52□□□□□ -0.41
CSTF3-205ENST00000524775 GOLGA2P5Q9HBQ8 144 aa12.52□□□□□ -0.41
CSTF3-205ENST00000524775 RGS18Q9NS28 235 aa12.52□□□□□ -0.41
CSTF3-205ENST00000524775 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-205ENST00000524775 CYTH4Q9UIA0 394 aa12.52□□□□□ -0.41
CSTF3-205ENST00000524775 BARX2Q9UMQ3 279 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-205ENST00000524775 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
CSTF3-205ENST00000524775 NLRC5Q86WI3 1866 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 VWA8A3KMH1 1905 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
CSTF3-205ENST00000524775 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
CSTF3-205ENST00000524775 KIF4AO95239 1232 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 LSM8O95777 96 aaKnown RBP12.51□□□□□ -0.41
CSTF3-205ENST00000524775 FGFR1P11362 822 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
CSTF3-205ENST00000524775 MMP8P22894 467 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 RAB27AP51159 221 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 NDST1P52848 882 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 NAP1L1P55209 391 aaKnown RBP12.51□□□□□ -0.41
CSTF3-205ENST00000524775 TNNC1P63316 161 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 ORC1Q13415 861 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 TCTN1Q2MV58 587 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 ZNF572Q7Z3I7 529 aaPredicted RBP12.51□□□□□ -0.41
CSTF3-205ENST00000524775 PASD1Q8IV76 773 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 TTC39CQ8N584 583 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 HES6Q96HZ4 224 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 RNF208Q9H0X6 261 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 HYOU1Q9Y4L1 999 aa12.51□□□□□ -0.41
CSTF3-205ENST00000524775 KIAA0100Q14667 2235 aaKnown RBP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 KPNA7A9QM74 516 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 O00370 1275 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 DDX3YO15523 660 aaKnown RBP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 NBNO60934 754 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 PFKMP08237 780 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 FAM163BP0C2L3 166 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 MYBL1P10243 752 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 VDRP11473 427 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 SELPP16109 830 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 RRM1P23921 792 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 MLH1P40692 756 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 LILRA4P59901 499 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 CNGA2Q16280 664 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 PLEKHA7Q6IQ23 1121 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 C11orf63Q6NUN7 778 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 LRRC8DQ7L1W4 858 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 CPNE8Q86YQ8 564 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 MMS19Q96T76 1030 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 NUP85Q9BW27 656 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 CNOT8Q9UFF9 292 aaKnown RBP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 KIAA1257Q9ULG3 409 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
CSTF3-205ENST00000524775 SNX9Q9Y5X1 595 aa12.5□□□□□ -0.41
CSTF3-205ENST00000524775 BRCA2P51587 3418 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 LTBP2Q14767 1821 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 EFCAB8A8MWE9 144 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 CES2O00748 559 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 DYNC1I1O14576 645 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
CSTF3-205ENST00000524775 THP07101 528 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 HSPA8P11142 646 aaKnown RBP12.49□□□□□ -0.41
CSTF3-205ENST00000524775 COL6A1P12109 1028 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 SKIP12755 728 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
CSTF3-205ENST00000524775 PNPLA4P41247 253 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 TAF6P49848 677 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 SCNN1GP51170 649 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 PKDCCQ504Y2 493 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 C2CD6Q53TS8 623 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 PPP1R2P3Q6NXS1 205 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 LCLAT1Q6UWP7 414 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 SLC39A5Q6ZMH5 540 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 ANKRD33Q7Z3H0 272 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 UNC93AQ86WB7 457 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 OSTM1Q86WC4 334 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 CRYBG2Q8N1P7 616 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 CEP112Q8N8E3 955 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 TMEM35BQ8NCS4 154 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 C1orf131Q8NDD1 294 aaKnown RBP12.49□□□□□ -0.41
CSTF3-205ENST00000524775 CD101Q93033 1021 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 ARMC5Q96C12 935 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 ZNF560Q96MR9 790 aa12.49□□□□□ -0.41
CSTF3-205ENST00000524775 TRIM7Q9C029 511 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms