RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 SNX25Q9H3E2 840 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 OSGEPQ9NPF4 335 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 MTUS1Q9ULD2 1270 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
VPS13B-212ENST00000524330 POLIQ9UNA4 740 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 STXBP5LQ9Y2K9 1186 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 ALG6Q9Y672 507 aa10.6□□□□□ -0.71
VPS13B-212ENST00000524330 SMIM28A0A1B0GU29 152 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 RHOXF2BP0C7M4 288 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 MMP8P22894 467 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
VPS13B-212ENST00000524330 CXCR5P32302 372 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 MAN1A1P33908 653 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 RWDD2BP57060 319 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 TRIM32Q13049 653 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 GPS2Q13227 327 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 BFSP2Q13515 415 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 ZBTB6Q15916 424 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 ZNF394Q53GI3 561 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 C9orf57Q5W0N0 161 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
VPS13B-212ENST00000524330 ALKAL1Q6UXT8 129 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 MON1BQ7L1V2 547 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 MAATS1Q7Z4T9 603 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 PALB2Q86YC2 1186 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 APPL2Q8NEU8 664 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 OLIG1Q8TAK6 271 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 FEZF2Q8TBJ5 459 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 COG1Q8WTW3 980 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 TNIP3Q96KP6 325 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 PSMB7Q99436 277 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 RHOXF2Q9BQY4 288 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 C11orf70Q9BRQ4 267 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 PARD6BQ9BYG5 372 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 NXF3Q9H4D5 531 aaKnown RBP10.59□□□□□ -0.71
VPS13B-212ENST00000524330 STARD7Q9NQZ5 370 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 SNX9Q9Y5X1 595 aa10.59□□□□□ -0.71
VPS13B-212ENST00000524330 KRIT1O00522 736 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 ZNF185O15231 689 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 PSTPIP1O43586 416 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 ZNF623O75123 536 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 PROSCO94903 275 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 THP07101 528 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 CTSHP09668 335 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 H2AFXP16104 143 aaPredicted RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 COMTP21964 271 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 AKAP5P24588 427 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 LRPAP1P30533 357 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RAD23BP54727 409 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 MGAT3Q09327 533 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 PIGHQ14442 188 aaPredicted RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 HIC1Q14526 733 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 ZNF268Q14587 947 aaPredicted RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 LONRF2Q1L5Z9 754 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 UBXN11Q5T124 520 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 PLEKHA7Q6IQ23 1121 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 WDR93Q6P2C0 686 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 PASD1Q8IV76 773 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RHOT1Q8IXI2 618 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 IFT20Q8IY31 132 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RASGEF1CQ8N431 466 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 TOP6BLQ8N6T0 577 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 OR6B3Q8NGW1 331 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 SPATA18Q8TC71 538 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 TMEM40Q8WWA1 233 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 C18orf8Q96DM3 657 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
VPS13B-212ENST00000524330 FAM84AQ96KN4 292 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 UROC1Q96N76 676 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 ZSWIM1Q9BR11 485 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 FTHL17Q9BXU8 183 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 SLITRK6Q9H5Y7 841 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 SMYD3Q9H7B4 428 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 ERVK-5Q9HDB9 667 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 ACP6Q9NPH0 428 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 GDAP2Q9NXN4 497 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RASAL2Q9UJF2 1139 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 RAB21Q9UL25 225 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 TRIM17Q9Y577 477 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 PCDHA3Q9Y5H8 950 aa10.58□□□□□ -0.72
VPS13B-212ENST00000524330 A8MXQ7 604 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 KPNA7A9QM74 516 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 M0QYV0 167 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 PIRO00625 290 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 CHRNA1P02708 482 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 RRM1P23921 792 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 CTNNA1P35221 906 aaKnown RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 RAP1GAPP47736 663 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 NDST1P52848 882 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 C2orf54Q08AI8 447 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 PTP4A2Q12974 167 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms