RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CLRN1P58418 232 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 KIF22Q14807 665 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 ELF2Q15723 593 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 CRB2Q5IJ48 1285 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 DGKKQ5KSL6 1271 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 UTP14CQ5TAP6 766 aaKnown RBP7.04□□□□□ -1.28
SKP1-213ENST00000524288 EMC10Q5UCC4 262 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 RRAGBQ5VZM2 374 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 ZNF512Q96ME7 567 aaPredicted RBP7.04□□□□□ -1.28
SKP1-213ENST00000524288 SELENOOQ9BVL4 669 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 LSM14BQ9BX40 385 aaKnown RBP7.04□□□□□ -1.28
SKP1-213ENST00000524288 SLITRK6Q9H5Y7 841 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 SPON1Q9HCB6 807 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 CFAP97Q9P2B7 532 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 MAGED2Q9UNF1 606 aaPredicted RBP7.04□□□□□ -1.28
SKP1-213ENST00000524288 AGAP1Q9UPQ3 857 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 CEP83Q9Y592 693 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 A0A087WV62 115 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 NARSO43776 548 aaKnown RBP7.03□□□□□ -1.28
SKP1-213ENST00000524288 HAUS5O94927 633 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 AGFG2O95081 481 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 GNAI2P04899 355 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 RARBP10826 455 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
SKP1-213ENST00000524288 HABP2Q14520 560 aaPredicted RBP7.03□□□□□ -1.28
SKP1-213ENST00000524288 STARD3Q14849 445 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 SLC35G1Q2M3R5 365 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 ARL13BQ3SXY8 428 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 FAM111BQ6SJ93 734 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 TXLNBQ8N3L3 684 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 SLC15A4Q8N697 577 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 TMIEQ8NEW7 156 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 TBC1D15Q8TC07 691 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 TFAP2CQ92754 450 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 NMD3Q96D46 503 aaKnown RBP7.03□□□□□ -1.28
SKP1-213ENST00000524288 PLEKHG4BQ96PX9 1271 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 BRIP1Q9BX63 1249 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 STK31Q9BXU1 1019 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 MRPS18AQ9NVS2 196 aaKnown RBP7.03□□□□□ -1.28
SKP1-213ENST00000524288 JKAMPQ9P055 326 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 ITGB1BP2Q9UKP3 347 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 PADI4Q9UM07 663 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 HDAC5Q9UQL6 1122 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 TBC1D30Q9Y2I9 924 aa7.03□□□□□ -1.28
SKP1-213ENST00000524288 TRIM43BA6NCK2 446 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 B5MCH6 92 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 DNAJB5O75953 348 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 FGF18O76093 207 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 POMCP01189 267 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 ITGB1P05556 798 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 C1SP09871 688 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 TECP42680 631 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 HSPA7P48741 367 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 TGFB2P61812 414 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 FHL2Q14192 279 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 CSRP2Q16527 193 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 MPEG1Q2M385 716 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 FKBP15Q5T1M5 1219 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 ATXN7L2Q5T6C5 722 aaPredicted RBP7.02□□□□□ -1.29
SKP1-213ENST00000524288 MICU3Q86XE3 530 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 TMPRSS6Q8IU80 811 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 SYTL1Q8IYJ3 562 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 MB21D1Q8N884 522 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 ATP11CQ8NB49 1132 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 SLC17A8Q8NDX2 589 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 OR10H5Q8NGA6 315 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 TRIM43Q96BQ3 446 aaPredicted RBP7.02□□□□□ -1.29
SKP1-213ENST00000524288 C18orf8Q96DM3 657 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 MSLNLQ96KJ4 702 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 CPPED1Q9BRF8 314 aaPredicted RBP7.02□□□□□ -1.29
SKP1-213ENST00000524288 HERPUD2Q9BSE4 406 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 DPH1Q9BZG8 443 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 IMPG2Q9BZV3 1241 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 TBC1D23Q9NUY8 699 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 PCDHGB3Q9Y5G1 929 aa7.02□□□□□ -1.29
SKP1-213ENST00000524288 A0A1W2PPC4 97 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 TBKBP1A7MCY6 615 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 PJA2O43164 708 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 PRSS23O95084 383 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 PEX11BO96011 259 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 GRPP07492 148 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 FGFR2P21802 821 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 UCP3P55916 312 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 TUBA3CQ13748 450 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 KRT72Q14CN4 511 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 UBXN2BQ14CS0 331 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 BMT2Q1RMZ1 405 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 LMBRD2Q68DH5 695 aaPredicted RBP7.01□□□□□ -1.29
SKP1-213ENST00000524288 TUBA3EQ6PEY2 450 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 UNC13DQ70J99 1090 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 ELOA2Q8IYF1 753 aaPredicted RBP7.01□□□□□ -1.29
SKP1-213ENST00000524288 MYCT1Q8N699 235 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 DNAJC5GQ8N7S2 189 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 NLGN4YQ8NFZ3 816 aaPredicted RBP7.01□□□□□ -1.29
SKP1-213ENST00000524288 OR56A3Q8NH54 315 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 ZNF566Q969W8 418 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 IQCDQ96DY2 449 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 LRRC46Q96FV0 321 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 SNX22Q96L94 193 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms