RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MRGPREQ86SM8 312 aa7.41□□□□□ -1.22
CPNE3-206ENST00000523469 CFAP52Q8N1V2 620 aa7.41□□□□□ -1.22
CPNE3-206ENST00000523469 NT5C1BQ96P26 610 aa7.41□□□□□ -1.22
CPNE3-206ENST00000523469 VKORC1Q9BQB6 163 aa7.41□□□□□ -1.22
CPNE3-206ENST00000523469 PIH1D1Q9NWS0 290 aaKnown RBP7.41□□□□□ -1.22
CPNE3-206ENST00000523469 NEU2Q9Y3R4 380 aa7.41□□□□□ -1.22
CPNE3-206ENST00000523469 A0A1W2PPL8 197 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 PHGDHO43175 533 aaKnown RBP7.4□□□□□ -1.22
CPNE3-206ENST00000523469 NARSO43776 548 aaKnown RBP7.4□□□□□ -1.22
CPNE3-206ENST00000523469 CDKL5O76039 1030 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ZNF202O95125 648 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ABHD16AO95870 558 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ZBED1O96006 694 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 HDCP19113 662 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 TACR2P21452 398 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 CACNB3P54284 484 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 USP14P54578 494 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 HSPA2P54652 639 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 CRB2Q5IJ48 1285 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ARHGEF19Q8IW93 802 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 SMOQ99835 787 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ADAM2Q99965 735 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ALOXE3Q9BYJ1 711 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 TINAGL1Q9GZM7 467 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-206ENST00000523469 MMRN2Q9H8L6 949 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ZMAT3Q9HA38 289 aaKnown RBP7.4□□□□□ -1.22
CPNE3-206ENST00000523469 GALNT9Q9HCQ5 603 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 TMEM74BQ9NUR3 256 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 HS3ST4Q9Y661 456 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 EPRSP07814 1512 aaKnown RBP7.4□□□□□ -1.22
CPNE3-206ENST00000523469 ERICH3Q5RHP9 1530 aa7.4□□□□□ -1.22
CPNE3-206ENST00000523469 BCORL1Q5H9F3 1711 aa7.4□□□□□ -1.23
CPNE3-206ENST00000523469 CENPVL1A0A0U1RR11 272 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 CCDC195A0A1B0GUA6 201 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 TPP1O14773 563 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 C6P13671 934 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 KCNA2P16389 499 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 KCNJ5P48544 419 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 GUCY1B3Q02153 619 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 TCF15Q12870 199 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 CNN3Q15417 329 aaKnown RBP7.39□□□□□ -1.23
CPNE3-206ENST00000523469 CYP2A13Q16696 494 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 LY6G5CQ5SRR4 150 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 KCNV1Q6PIU1 500 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-206ENST00000523469 USP37Q86T82 979 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 CELF5Q8N6W0 485 aaKnown RBP7.39□□□□□ -1.23
CPNE3-206ENST00000523469 Q8NA96 180 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 PROKR1Q8TCW9 393 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 RNF31Q96EP0 1072 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 MRGPRX1Q96LB2 322 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 CNPPD1Q9BV87 410 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
CPNE3-206ENST00000523469 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 LPXNO60711 386 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 FZD7O75084 574 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 FOSP01100 380 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-206ENST00000523469 MCM7P33993 719 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 HLTFQ14527 1009 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPNE3-206ENST00000523469 IGFL4Q6B9Z1 124 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 PPP4R4Q6NUP7 873 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 SWSAP1Q6NVH7 229 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 TAPT1Q6NXT6 567 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 CCDC149Q6ZUS6 474 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 CLNKQ7Z7G1 428 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 TRIB1Q96RU8 372 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 ATP6V0A4Q9HBG4 840 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 VSX1Q9NZR4 365 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-206ENST00000523469 CTTNBP2NLQ9P2B4 639 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 AGAP1Q9UPQ3 857 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 MED16Q9Y2X0 877 aa7.38□□□□□ -1.23
CPNE3-206ENST00000523469 A0A1W2PS29 197 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 UNC119BA6NIH7 251 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 POLRMTO00411 1230 aaKnown RBP7.37□□□□□ -1.23
CPNE3-206ENST00000523469 FRS3O43559 492 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 SPDEFO95238 335 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 NPR1P16066 1061 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 FAM193AP78312 1265 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 ABHD18Q0P651 414 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 GALEQ14376 348 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 CCDC181Q5TID7 509 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 RNF220Q5VTB9 566 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 DARS2Q6PI48 645 aaKnown RBP7.37□□□□□ -1.23
CPNE3-206ENST00000523469 COLGALT2Q8IYK4 626 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 Q8N1X5 172 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 FAM156AQ8NDB6 213 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 NSUN7Q8NE18 718 aaKnown RBP7.37□□□□□ -1.23
CPNE3-206ENST00000523469 IL31RAQ8NI17 732 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 KBTBD7Q8WVZ9 684 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 FUBP1Q96AE4 644 aaKnown RBP7.37□□□□□ -1.23
CPNE3-206ENST00000523469 TTC17Q96AE7 1141 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 NACC2Q96BF6 587 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 TIFAQ96CG3 184 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 CFAP43Q8NDM7 1665 aa7.37□□□□□ -1.23
CPNE3-206ENST00000523469 PTPRGP23470 1445 aa7.36□□□□□ -1.23
CPNE3-206ENST00000523469 PRAMEF33A0A0G2JMD5 474 aa7.36□□□□□ -1.23
CPNE3-206ENST00000523469 CFAP69A5D8W1 941 aa7.36□□□□□ -1.23
CPNE3-206ENST00000523469 E7ENX8 843 aa7.36□□□□□ -1.23
CPNE3-206ENST00000523469 M0QYG6 137 aa7.36□□□□□ -1.23
CPNE3-206ENST00000523469 PRAMEF10O60809 474 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms