RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ATRIPQ8WXE1 791 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 RMDN1Q96DB5 314 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 CEP170P1Q96L14 293 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 TBC1D32Q96NH3 1257 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 TCF12Q99081 682 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 COLEC11Q9BWP8 271 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-220ENST00000522658 ZDHHC7Q9NXF8 308 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.93□□□□□ -1.3
PABPC1-220ENST00000522658 GMEB2Q9UKD1 530 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 USP18Q9UMW8 372 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 DENND4AQ7Z401 1863 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 A0A096LPE4 126 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 A0A1W2PPZ6 126 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 FAM170BA6NMN3 283 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 INO80B-WBP1J3KQ70 363 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 MSH4O15457 936 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 TEX28O15482 410 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 ZNF623O75123 536 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 SRGAP2CP0DJJ0 459 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 AXLP30530 894 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 MLH1P40692 756 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 MAGEA9P43362 315 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 SSRP1Q08945 709 aaKnown RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 NECTIN1Q15223 517 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.31e-17■■□□□ 12.1
PABPC1-220ENST00000522658 USP41Q3LFD5 358 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 PLA2G4FQ68DD2 849 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 ZNF280BQ86YH2 543 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 RNF149Q8NC42 400 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 PJA1Q8NG27 643 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 HDAC7Q8WUI4 952 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 RSAD2Q8WXG1 361 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 BRF1Q92994 677 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 CCDC51Q96ER9 411 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 JAKMIP1Q96N16 626 aaKnown RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 NAP1L4Q99733 375 aaKnown RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 SH2D3AQ9BRG2 576 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 RNF26Q9BY78 433 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 CLEC4MQ9H2X3 399 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 VPS54Q9P1Q0 977 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 EPS15L1Q9UBC2 864 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 DDX25Q9UHL0 483 aaKnown RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 BRPF3Q9ULD4 1205 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 MRPS17Q9Y2R5 130 aaKnown RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
PABPC1-220ENST00000522658 ZFP37Q9Y6Q3 630 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 SF3B1O75533 1304 aaKnown RBP eCLIP6.92□□□□□ -1.3
PABPC1-220ENST00000522658 ZFHX2Q9C0A1 2572 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 CCDC194A0A1B0GVG4 234 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 A0A1W2PP55 124 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 MED19A0JLT2 244 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 TMEM150BA6NC51 233 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 MEIS3P2A8K0S8 358 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 ASAP2O43150 1006 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 CYP26A1O43174 497 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 MAFO75444 373 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 TADA2AO75478 443 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 RFPL2O75678 378 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 BAG4O95429 457 aaKnown RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 P4HBP07237 508 aaKnown RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 SP9P0CG40 484 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 NCLP19338 710 aaKnown RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PSMA5P28066 241 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 QARSP47897 775 aaKnown RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 GRIA4P48058 902 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 SCNN1GP51170 649 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 LMNB2Q03252 620 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PCDH1Q08174 1060 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 GRIK3Q13003 919 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 DRP2Q13474 957 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 EMC2Q15006 297 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PPM1LQ5SGD2 360 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 NCAPH2Q6IBW4 605 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 FUT10Q6P4F1 479 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PDXDC1Q6P996 788 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 AGMOQ6ZNB7 445 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 Q6ZUG5 572 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PALB2Q86YC2 1186 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 GALNT12Q8IXK2 581 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 MYADMQ96S97 322 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 YIPF2Q9BWQ6 316 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 RHOBTB2Q9BYZ6 727 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 FOXQ1Q9C009 403 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 GSX1Q9H4S2 264 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-220ENST00000522658 BRMS1Q9HCU9 246 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 SH3GLB2Q9NR46 395 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 NUMBLQ9Y6R0 609 aa6.91□□□□□ -1.3
PABPC1-220ENST00000522658 MYO15AQ9UKN7 3530 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CACNA1HO95180 2353 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 KANSL1LA0AUZ9 987 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ARL5CA6NH57 179 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PRR5-ARHGAP8B1AHC4 643 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 TGM5O43548 720 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms