RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ITGB3P05106 788 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 GLULP15104 373 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 NBL1P41271 181 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 UBXN2BQ14CS0 331 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 TMC8Q8IU68 726 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 THEM5Q8N1Q8 247 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 ZNF560Q96MR9 790 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 SEPT5Q99719 369 aaPredicted RBP22.34■■□□□ 1.17
SDCBP-209ENST00000522243 CUEDC2Q9H467 287 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 SLITRK6Q9H5Y7 841 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 PDE11AQ9HCR9 933 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 DLGAP2Q9P1A6 1054 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 AGAP1Q9UPQ3 857 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 MTF2Q9Y483 593 aaPredicted RBP22.34■■□□□ 1.17
SDCBP-209ENST00000522243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.33■■□□□ 1.17
SDCBP-209ENST00000522243 CASP1P29466 404 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 VIPR2P41587 438 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 PRKCQQ04759 706 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 MGAT5BQ3V5L5 792 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 TPRG1Q6ZUI0 275 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 STXBP4Q6ZWJ1 553 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 LRRTM3Q86VH5 581 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 GPIHBP1Q8IV16 184 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 GPD1LQ8N335 351 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 C1orf127Q8N9H9 656 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 IQUBQ8NA54 791 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 ZSCAN18Q8TBC5 510 aaPredicted RBP22.33■■□□□ 1.17
SDCBP-209ENST00000522243 FAM200AQ8TCP9 573 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 SMARCD2Q92925 531 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 ZNF334Q9HCZ1 680 aaPredicted RBP22.33■■□□□ 1.17
SDCBP-209ENST00000522243 HEBP1Q9NRV9 189 aa22.33■■□□□ 1.17
SDCBP-209ENST00000522243 PROB1E7EW31 1015 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 POLR2DO15514 142 aaKnown RBP22.32■■□□□ 1.16
SDCBP-209ENST00000522243 AMPD3Q01432 767 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 LMBRD2Q68DH5 695 aaPredicted RBP22.32■■□□□ 1.16
SDCBP-209ENST00000522243 VITQ6UXI7 678 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 ASCL5Q7RTU5 278 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 DNAJB7Q7Z6W7 309 aaPredicted RBP22.32■■□□□ 1.16
SDCBP-209ENST00000522243 CSGALNACT2Q8N6G5 542 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 CACTINQ8WUQ7 758 aaKnown RBP22.32■■□□□ 1.16
SDCBP-209ENST00000522243 LPIN3Q9BQK8 851 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 DDX23Q9BUQ8 820 aaKnown RBP22.32■■□□□ 1.16
SDCBP-209ENST00000522243 TRMT61BQ9BVS5 477 aaKnown RBP22.32■■□□□ 1.16
SDCBP-209ENST00000522243 BRD9Q9H8M2 597 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 PCDHA7Q9UN72 937 aa22.32■■□□□ 1.16
SDCBP-209ENST00000522243 FAM170BA6NMN3 283 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 KRT19P08727 400 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 HOXD13P35453 343 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 ME1P48163 572 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 BFSP1Q12934 665 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 STXBP5Q5T5C0 1151 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 KCNG4Q8TDN1 519 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 PSMG2Q969U7 264 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 BLZF1Q9H2G9 400 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 LTB4R2Q9NPC1 389 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 NCANO14594 1321 aa22.31■■□□□ 1.16
SDCBP-209ENST00000522243 TICRRQ7Z2Z1 1910 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 TMEM191BP0C7N4 346 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 PDIA4P13667 645 aaKnown RBP22.3■■□□□ 1.16
SDCBP-209ENST00000522243 GDI1P31150 447 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 PNPLA4P41247 253 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 TUFMP49411 452 aaKnown RBP22.3■■□□□ 1.16
SDCBP-209ENST00000522243 DNM1Q05193 864 aaKnown RBP22.3■■□□□ 1.16
SDCBP-209ENST00000522243 FAM26FQ5R3K3 315 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 CBWD2Q8IUF1 395 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 GIPC2Q8TF65 315 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 C7orf25Q9BPX7 421 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 MTMR12Q9C0I1 747 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 ATXN3LQ9H3M9 355 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 ABI2Q9NYB9 513 aaPredicted RBP22.3■■□□□ 1.16
SDCBP-209ENST00000522243 HSFX1Q9UBD0 423 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 ASB3Q9Y575 518 aa22.3■■□□□ 1.16
SDCBP-209ENST00000522243 PRR23AA6NEV1 266 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 HEPACAM2A8MVW5 462 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 PSMC3P17980 439 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 ATF6P18850 670 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 TARSP26639 723 aaKnown RBP22.29■■□□□ 1.16
SDCBP-209ENST00000522243 GABRR2P28476 465 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 AFMP43652 599 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 GAREM2Q75VX8 874 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 ITIH5Q86UX2 942 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 C1orf210Q8IVY1 113 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 NELFCDQ8IXH7 590 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 PDCL2Q8N4E4 241 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 CXorf38Q8TB03 319 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 NKD2Q969F2 451 aaPredicted RBP22.29■■□□□ 1.16
SDCBP-209ENST00000522243 RSPRY1Q96DX4 576 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 GPR88Q9GZN0 384 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 TMLHEQ9NVH6 421 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 FAM13BQ9NYF5 915 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 HSPBP1Q9NZL4 362 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 L1RE1Q9UN81 338 aa22.29■■□□□ 1.16
SDCBP-209ENST00000522243 ZNF233A6NK53 670 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 EIF3DO15371 548 aaKnown RBP eCLIP22.28■■□□□ 1.16
SDCBP-209ENST00000522243 VEPH1Q14D04 833 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 RESP18Q5W5W9 173 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 UNC13DQ70J99 1090 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 EPM2AIP1Q7L775 607 aaPredicted RBP22.28■■□□□ 1.16
SDCBP-209ENST00000522243 DCP1BQ8IZD4 617 aaKnown RBP22.28■■□□□ 1.16
SDCBP-209ENST00000522243 RDH13Q8NBN7 331 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms