RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 FERP16591 822 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 RAD23BP54727 409 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 KLHL30Q0D2K2 578 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 TOP6BLQ8N6T0 577 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 B3GALT6Q96L58 329 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 BAG1Q99933 345 aaPredicted RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 LPIN3Q9BQK8 851 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 HAUS4Q9H6D7 363 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 BARX2Q9UMQ3 279 aaPredicted RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 SOWAHDA6NJG2 315 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 TACC1O75410 805 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 LINC00271P0C7V0 271 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 TKTP29401 623 aaKnown RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 GNL1P36915 607 aaPredicted RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 CDR1P51861 262 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 ZNF132P52740 706 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 YWHAEP62258 255 aaKnown RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 CCZ1BP86790 482 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 CCZ1P86791 482 aaPredicted RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 INCA1Q0VD86 236 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 TDRD12Q587J7 1177 aaKnown RBP14.29□□□□□ -0.12
CLK4-210ENST00000522136 DPH6Q7L8W6 267 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 TAS1R1Q7RTX1 841 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 SLC20A1Q8WUM9 679 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 ZNF558Q96NG5 402 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 SNX25Q9H3E2 840 aa14.29□□□□□ -0.12
CLK4-210ENST00000522136 PDE4DIPQ5VU43 2346 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 TSC2P49815 1807 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 FAM170AA1A519 330 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 A8MXQ7 604 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 SERPING1P05155 500 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 ODC1P11926 461 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 LAG3P18627 525 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 FECHP22830 423 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 ACAT1P24752 427 aaKnown RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 EIF4A3P38919 411 aaKnown RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 RGS19P49795 217 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 PTK2Q05397 1052 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 MTF1Q14872 753 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 FAM171A1Q5VUB5 890 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 FUT10Q6P4F1 479 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 CEP57Q86XR8 500 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 SLC4A11Q8NBS3 891 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 IGSF21Q96ID5 467 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 DPEP3Q9H4B8 488 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 PUF60Q9UHX1 559 aaKnown RBP14.28□□□□□ -0.12
CLK4-210ENST00000522136 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
CLK4-210ENST00000522136 GABRDO14764 452 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 ATP2C2O75185 946 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 ARHGEF15O94989 841 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 CYP11B1P15538 503 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 PRKCIP41743 596 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 TAF3Q5VWG9 929 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 SPRED2Q7Z698 418 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 ACOT1Q86TX2 421 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 SLC39A11Q8N1S5 342 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 TFAP2BQ92481 460 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 TMEM176AQ96HP8 235 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 ZSWIM1Q9BR11 485 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 VN1R3Q9BXE9 311 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 NT5C1AQ9BXI3 368 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 STXBP5LQ9Y2K9 1186 aa14.27□□□□□ -0.12
CLK4-210ENST00000522136 TRAPPC3O43617 180 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 CYP11A1P05108 521 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 CFHP08603 1231 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 PAX3P23760 479 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 BRD2P25440 801 aaKnown RBP14.27□□□□□ -0.13
CLK4-210ENST00000522136 CCDC142Q17RM4 750 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 KIAA0319Q5VV43 1072 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 CYP26C1Q6V0L0 522 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 RAD9BQ6WBX8 426 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 C12orf29Q8N999 325 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 OLIG1Q8TAK6 271 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 HEXIM2Q96MH2 286 aaKnown RBP14.27□□□□□ -0.13
CLK4-210ENST00000522136 RTP3Q9BQQ7 232 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 NHEJ1Q9H9Q4 299 aaPredicted RBP14.27□□□□□ -0.13
CLK4-210ENST00000522136 DDX43Q9NXZ2 648 aaKnown RBP14.27□□□□□ -0.13
CLK4-210ENST00000522136 SPG21Q9NZD8 308 aa14.27□□□□□ -0.13
CLK4-210ENST00000522136 NOCTQ9UK39 431 aaKnown RBP14.27□□□□□ -0.13
CLK4-210ENST00000522136 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.135e-7■■■■■ 98.4
CLK4-210ENST00000522136 THAP12O43422 761 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 MMEP08473 750 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 CCDC172P0C7W6 258 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 CD19P15391 556 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 CHRNB2P17787 502 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 GNA15P30679 374 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 PSMC1P62191 440 aaKnown RBP14.26□□□□□ -0.13
CLK4-210ENST00000522136 CDK17Q00537 523 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 METTL23Q86XA0 190 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 TMTC1Q8IUR5 882 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 TMEM86AQ8N2M4 240 aa14.26□□□□□ -0.13
CLK4-210ENST00000522136 DDX1Q92499 740 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms