RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 A0A0J9YVX5 310 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 C2orf71A6NGG8 1288 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 CCDC160A6NGH7 325 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 ATP9BO43861 1147 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 GZMAP12544 262 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 ACTR3P61158 418 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 ASPHQ12797 758 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 TMED1Q13445 227 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 COG2Q14746 738 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 C9orf131Q5VYM1 1079 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 TTBK2Q6IQ55 1244 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 TPTE2Q6XPS3 522 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 RAPH1Q70E73 1250 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 ANKS1BQ7Z6G8 1248 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 TCP10LQ8TDR4 215 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 OXNAD1Q96HP4 312 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 PANX3Q96QZ0 392 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 THTPAQ9BU02 230 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 GPCPD1Q9NPB8 672 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 UVRAGQ9P2Y5 699 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 PPM1HQ9ULR3 514 aa10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 COL5A3P25940 1745 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-230ENST00000521724 DDX60LQ5H9U9 1706 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 FCHO1O14526 889 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 PLSCR1O15162 318 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 PGM3O95394 542 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 SGPL1O95470 568 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ENO1P06733 434 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 NMT1P30419 496 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 RHBDL3P58872 404 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 FASTKD3Q14CZ7 662 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 RASA2Q15283 850 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 MAP7D3Q8IWC1 876 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 SLFN12Q8IYM2 578 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 SLC25A41Q8N5S1 370 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 CLPTM1LQ96KA5 538 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 HERPUD2Q9BSE4 406 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 FOXP3Q9BZS1 431 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 NMUR2Q9GZQ4 415 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 C12orf65Q9H3J6 166 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 PSTPIP2Q9H939 334 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 KCNK13Q9HB14 408 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ARFGEF1Q9Y6D6 1849 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 GOLGA8RI6L899 631 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 SLC26A4O43511 780 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ZNF862O60290 1169 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 CYP1A2P05177 515 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 MYL2P10916 166 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 RPA1P27694 616 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ADARP55265 1226 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ITGA9Q13797 1035 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 HNRNPDQ14103 355 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ULK2Q8IYT8 1036 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 MYCT1Q8N699 235 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 RBM15BQ8NDT2 890 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 EPS8L1Q8TE68 723 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 MTBPQ96DY7 904 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 VPS11Q9H270 941 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 ACP6Q9NPH0 428 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 OLFML3Q9NRN5 406 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 DDX18Q9NVP1 670 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 GTF3C4Q9UKN8 822 aa10.11□□□□□ -0.79
CTNNA1-230ENST00000521724 CDK5RAP2Q96SN8 1893 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 PNMA6FA0A0J9YX94 578 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 TM7SF2O76062 418 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 FAM13AO94988 1023 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 DLDP09622 509 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 UQCRBP14927 111 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 MAPK4P31152 587 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 SLC16A2P36021 539 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 GPSM2P81274 684 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 CENPCQ03188 943 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 KDSRQ06136 332 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 CETN1Q12798 172 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 BFSP1Q12934 665 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 CYLC2Q14093 348 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 MMEL1Q495T6 779 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 NOP9Q86U38 636 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 PDSS2Q86YH6 399 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 ARHGEF19Q8IW93 802 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 ZBED8Q8IZ13 594 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 FBXO27Q8NI29 283 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 SNRNP27Q8WVK2 155 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 NYXQ9GZU5 481 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 RANBP17Q9H2T7 1088 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 SLC17A7Q9P2U7 560 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 SLC7A8Q9UHI5 535 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 ANAPC7Q9UJX3 599 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 GNEQ9Y223 722 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 TXNDC9O14530 226 aa10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 EIF3DO15371 548 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNNA1-230ENST00000521724 BUD23O43709 281 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms