RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MAST3O60307 1309 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 MYADML2A6NDP7 307 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 CCDC154A6NI56 674 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 ATP8B2P98198 1209 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 ANO6Q4KMQ2 910 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 ZKSCAN2Q63HK3 967 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 DARS2Q6PI48 645 aaKnown RBP5.04□□□□□ -1.6
SQLE-204ENST00000520493 GADL1Q6ZQY3 521 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 TOGARAM2Q6ZUX3 1019 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 GPR149Q86SP6 731 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 TTC7BQ86TV6 843 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 ADGRG3Q86Y34 549 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 CAMKK1Q8N5S9 505 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 AOPEPQ8N6M6 819 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 ZBTB34Q8NCN2 500 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 CAGE1Q8TC20 777 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 NELL1Q92832 810 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 GJA10Q969M2 543 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 MARS2Q96GW9 593 aaKnown RBP5.04□□□□□ -1.6
SQLE-204ENST00000520493 Q96MF0 132 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 PTGFRNQ9P2B2 879 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 LRIT1Q9P2V4 623 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
SQLE-204ENST00000520493 TRGV11A0A075B6L2 103 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 GOLIM4O00461 696 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 APAF1O14727 1248 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 UBXN7O94888 489 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 ARIH2O95376 493 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 RPL17P18621 184 aaKnown RBP5.03□□□□□ -1.6
SQLE-204ENST00000520493 VAV2P52735 878 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 AK2P54819 239 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 GPSM2P81274 684 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 KRT72Q14CN4 511 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 CYP2A13Q16696 494 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 PABPC1LQ4VXU2 614 aaKnown RBP5.03□□□□□ -1.6
SQLE-204ENST00000520493 IL31Q6EBC2 164 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 Q6ZNX1 250 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 PRIMA1Q86XR5 153 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 KRT78Q8N1N4 520 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 FUBP1Q96AE4 644 aaKnown RBP5.03□□□□□ -1.6
SQLE-204ENST00000520493 PTCD3Q96EY7 689 aaKnown RBP5.03□□□□□ -1.6
SQLE-204ENST00000520493 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 PACSIN1Q9BY11 444 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 PRDM16Q9HAZ2 1276 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 POLHQ9Y253 713 aa5.03□□□□□ -1.6
SQLE-204ENST00000520493 CAPN8A6NHC0 703 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 A6NNZ2 444 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 PMM2O15305 246 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 FRS3O43559 492 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 ORC4O43929 436 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 PRSS23O95084 383 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 TYRP1P17643 537 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 FBLP22087 321 aaKnown RBP5.02□□□□□ -1.61
SQLE-204ENST00000520493 NEK3P51956 506 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 NOMO3P69849 1222 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 MRPS35P82673 323 aaKnown RBP5.02□□□□□ -1.61
SQLE-204ENST00000520493 ZNF844Q08AG5 666 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 FOXI1Q12951 378 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 DHX8Q14562 1220 aaKnown RBP5.02□□□□□ -1.61
SQLE-204ENST00000520493 RAB39AQ14964 217 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 ZRSR2Q15696 482 aaKnown RBP5.02□□□□□ -1.61
SQLE-204ENST00000520493 PRR16Q569H4 304 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 NOMO2Q5JPE7 1267 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 TMED8Q6PL24 325 aaPredicted RBP5.02□□□□□ -1.61
SQLE-204ENST00000520493 SPICE1Q8N0Z3 855 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 CDK5RAP3Q96JB5 506 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 HEPHQ9BQS7 1158 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 DUSP26Q9BV47 211 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 SYNPO2LQ9H987 977 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.02□□□□□ -1.61
SQLE-204ENST00000520493 TLK1Q9UKI8 766 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 PHTF1Q9UMS5 762 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 NEU2Q9Y3R4 380 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 PCDHA13Q9Y5I0 950 aa5.02□□□□□ -1.61
SQLE-204ENST00000520493 A0A088AWK7 358 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 HMGB1P1B2RPK0 211 aaPredicted RBP5.01□□□□□ -1.61
SQLE-204ENST00000520493 GRM6O15303 877 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 HTR1BP28222 390 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 CD38P28907 300 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 MPLP40238 635 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 TM4SF4P48230 202 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 FXR1P51114 621 aaKnown RBP eCLIP5.01□□□□□ -1.61
SQLE-204ENST00000520493 ELLP55199 621 aaPredicted RBP5.01□□□□□ -1.61
SQLE-204ENST00000520493 DSC2Q02487 901 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 SCAPQ12770 1279 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 TARDBPQ13148 414 aaKnown RBP eCLIP5.01□□□□□ -1.61
SQLE-204ENST00000520493 HSP90AB4PQ58FF6 505 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 NPNTQ6UXI9 565 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 CCDC149Q6ZUS6 474 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 RD3Q7Z3Z2 195 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 CLNKQ7Z7G1 428 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 MORC1Q86VD1 984 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 FAM156AQ8NDB6 213 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 NSUN6Q8TEA1 469 aaKnown RBP5.01□□□□□ -1.61
SQLE-204ENST00000520493 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
SQLE-204ENST00000520493 CGRRF1Q99675 332 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms