RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 IQUBQ8NA54 791 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 OR10T2Q8NGX3 314 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 SHKBP1Q8TBC3 707 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 ZSCAN18Q8TBC5 510 aaPredicted RBP27.33■■□□□ 1.97
VEGFA-220ENST00000519767 PSMG2Q969U7 264 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 ZNF560Q96MR9 790 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 SLITRK6Q9H5Y7 841 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 LTB4R2Q9NPC1 389 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 KBTBD4Q9NVX7 518 aa27.33■■□□□ 1.97
VEGFA-220ENST00000519767 MYH15Q9Y2K3 1946 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 MAN2B1O00754 1011 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 CUTAO60888 179 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 GLULP15104 373 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 TFAMQ00059 246 aaKnown RBP27.32■■□□□ 1.96
VEGFA-220ENST00000519767 SLC39A12Q504Y0 691 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 TPRG1Q6ZUI0 275 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 MFSD6LQ8IWD5 586 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 DCP1BQ8IZD4 617 aaKnown RBP27.32■■□□□ 1.96
VEGFA-220ENST00000519767 SAAL1Q96ER3 474 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 TMEM209Q96SK2 561 aa27.32■■□□□ 1.96
VEGFA-220ENST00000519767 RBAKQ9NYW8 714 aaPredicted RBP27.32■■□□□ 1.96
VEGFA-220ENST00000519767 GJA1P17302 382 aa27.31■■□□□ 1.96
VEGFA-220ENST00000519767 WSCD1Q658N2 575 aa27.31■■□□□ 1.96
VEGFA-220ENST00000519767 TMC8Q8IU68 726 aa27.31■■□□□ 1.96
VEGFA-220ENST00000519767 CLDN23Q96B33 292 aa27.31■■□□□ 1.96
VEGFA-220ENST00000519767 HEBP1Q9NRV9 189 aa27.31■■□□□ 1.96
VEGFA-220ENST00000519767 MTF2Q9Y483 593 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-220ENST00000519767 A0A1W2PRU2 124 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 TULP1O00294 542 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-220ENST00000519767 NRG2O14511 850 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-220ENST00000519767 LRRN2O75325 713 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 PRPF6O94906 941 aaKnown RBP27.3■■□□□ 1.96
VEGFA-220ENST00000519767 HSP90AA1P07900 732 aaKnown RBP27.3■■□□□ 1.96
VEGFA-220ENST00000519767 CD72P21854 359 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 VIPR2P41587 438 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 GRM2Q14416 872 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 VEPH1Q14D04 833 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 E2F4Q16254 413 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 ZC3H14Q6PJT7 736 aaKnown RBP27.3■■□□□ 1.96
VEGFA-220ENST00000519767 VITQ6UXI7 678 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 HSCBQ8IWL3 235 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 SPPL2BQ8TCT7 592 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 AGAP1Q9UPQ3 857 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 ZNF292O60281 2723 aa27.3■■□□□ 1.96
VEGFA-220ENST00000519767 ZNF263O14978 683 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 SP9P0CG40 484 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 GDI1P31150 447 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 RPS9P46781 194 aaKnown RBP27.29■■□□□ 1.96
VEGFA-220ENST00000519767 ARHGAP15Q53QZ3 475 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 CNNM4Q6P4Q7 775 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 LRRC52Q8N7C0 313 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 FAM200AQ8TCP9 573 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 SEPT5Q99719 369 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-220ENST00000519767 CBWD1Q9BRT8 395 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 TRIM9Q9C026 710 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 ZNF334Q9HCZ1 680 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-220ENST00000519767 SPATA6Q9NWH7 488 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-220ENST00000519767 ITGA11Q9UKX5 1188 aa27.29■■□□□ 1.96
VEGFA-220ENST00000519767 MYO15AQ9UKN7 3530 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 POLR2BP30876 1174 aaKnown RBP27.28■■□□□ 1.96
VEGFA-220ENST00000519767 MLLT6P55198 1093 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-220ENST00000519767 RBP5P82980 135 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 SURF1Q15526 300 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 MGAT5BQ3V5L5 792 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 ATL3Q6DD88 541 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 GPD1LQ8N335 351 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 CSGALNACT2Q8N6G5 542 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 C1orf127Q8N9H9 656 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 ZSWIM2Q8NEG5 633 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 FGFBP2Q9BYJ0 223 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 ATXN3LQ9H3M9 355 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 PCIF1Q9H4Z3 704 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 FBXO4Q9UKT5 387 aa27.28■■□□□ 1.96
VEGFA-220ENST00000519767 R3HCC1Q9Y3T6 440 aaKnown RBP27.28■■□□□ 1.96
VEGFA-220ENST00000519767 GVINP1Q7Z2Y8 2422 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 F5P12259 2224 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 GOLGA8IPA6NC78 632 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 GOLGA8JA6NMD2 632 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 HEPACAM2A8MVW5 462 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 LAMTOR5O43504 91 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 HUS1O60921 280 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 ITGB3P05106 788 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 ZSCAN22P10073 491 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-220ENST00000519767 WEE1P30291 646 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 TSPY1Q01534 308 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 TAF12Q16514 161 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 NFE2Q16621 373 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-220ENST00000519767 ZNF528Q3MIS6 628 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 GAREM2Q75VX8 874 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 LRRTM3Q86VH5 581 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 YAF2Q8IY57 180 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 TMEM86AQ8N2M4 240 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 TTC9BQ8N6N2 239 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 KCNG4Q8TDN1 519 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 DHX58Q96C10 678 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 MAGEF1Q9HAY2 307 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 KIAA1586Q9HCI6 787 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 GDAP2Q9NXN4 497 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 ZMYM5Q9UJ78 669 aa27.27■■□□□ 1.96
VEGFA-220ENST00000519767 SPTBN4Q9H254 2564 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms