RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 FTHL17Q9BXU8 183 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 RGS18Q9NS28 235 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CTTNBP2NLQ9P2B4 639 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 HMGXB4Q9UGU5 601 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 GTF3C4Q9UKN8 822 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 GRID2IPA4D2P6 1211 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 MYBL1P10243 752 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 NDST1P52848 882 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 PAPD7Q5XG87 772 aaKnown RBP13.18□□□□□ -0.3
SPIDR-209ENST00000519141 SLC39A5Q6ZMH5 540 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 SLC4A11Q8NBS3 891 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 GSTCDQ8NEC7 633 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CPA5Q8WXQ8 436 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
SPIDR-209ENST00000519141 TWNKQ96RR1 684 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 NT5C1AQ9BXI3 368 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-209ENST00000519141 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
SPIDR-209ENST00000519141 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-209ENST00000519141 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
SPIDR-209ENST00000519141 CYP1A2P05177 515 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 CFHP08603 1231 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 SSTR3P32745 418 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-209ENST00000519141 HADHBP55084 474 aaKnown RBP13.17□□□□□ -0.3
SPIDR-209ENST00000519141 AMPD2Q01433 879 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 ORC1Q13415 861 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 TCEAL1Q15170 157 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 ZNF598Q86UK7 904 aaKnown RBP13.17□□□□□ -0.3
SPIDR-209ENST00000519141 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 TFAP2BQ92481 460 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 ZSWIM1Q9BR11 485 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 PCDHGC3Q9UN70 934 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 SAR1BQ9Y6B6 198 aa13.17□□□□□ -0.3
SPIDR-209ENST00000519141 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 C9IYK1 514 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 H0YGN5 161 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 SPTLC1O15269 473 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 FTCDO95954 541 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 VDRP11473 427 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 AFF1P51825 1210 aaKnown RBP13.16□□□□□ -0.3
SPIDR-209ENST00000519141 GRIK3Q13003 919 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 LIN9Q5TKA1 542 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 FAM43BQ6ZT52 329 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-209ENST00000519141 UNC93AQ86WB7 457 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 PHF13Q86YI8 300 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-209ENST00000519141 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 LRRC57Q8N9N7 239 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
SPIDR-209ENST00000519141 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-209ENST00000519141 MIOSQ9NXC5 875 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 UVRAGQ9P2Y5 699 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 CNOT8Q9UFF9 292 aaKnown RBP13.16□□□□□ -0.3
SPIDR-209ENST00000519141 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 HYOU1Q9Y4L1 999 aa13.16□□□□□ -0.3
SPIDR-209ENST00000519141 UQCRHLA0A096LP55 91 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 PODXLO00592 558 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 HUS1O60921 280 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 NBNO60934 754 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 MTA2O94776 668 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 EOMESO95936 686 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 UQCRHP07919 91 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 RPL9P32969 192 aaKnown RBP13.15□□□□□ -0.3
SPIDR-209ENST00000519141 LILRA4P59901 499 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 TLE2Q04725 743 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
SPIDR-209ENST00000519141 WHAMMP3Q1A5X7 153 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 MON1BQ7L1V2 547 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 RTN4RL1Q86UN2 441 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-209ENST00000519141 TOP6BLQ8N6T0 577 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 C1orf131Q8NDD1 294 aaKnown RBP13.15□□□□□ -0.3
SPIDR-209ENST00000519141 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-209ENST00000519141 SEPT8Q92599 483 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 VCPIP1Q96JH7 1222 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
SPIDR-209ENST00000519141 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms