RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 KLHL5Q96PQ7 755 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CDCA3Q99618 268 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 TTPALQ9BTX7 342 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 FAM124BQ9H5Z6 455 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 PDE11AQ9HCR9 933 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CHST7Q9NS84 486 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 INTS13Q9NVM9 706 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 RBAKQ9NYW8 714 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CLEC1BQ9P126 229 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 STK39Q9UEW8 545 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CD207Q9UJ71 328 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 COQ4Q9Y3A0 265 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 NUB1Q9Y5A7 615 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 IRAK3Q9Y616 596 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 XIRP2A4UGR9 3374 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ZNF233A6NK53 670 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 AKR1B15C9JRZ8 316 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ADAM12O43184 909 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 CCP110O43303 1012 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 XPOTO43592 962 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 EXOC3O60645 756 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 IL18RAPO95256 599 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 AFPP02771 609 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ADH1AP07327 375 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 SPATA31D3P0C874 917 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 IL9P15248 144 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ANXA13P27216 316 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 LRPAP1P30533 357 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 RPL9P32969 192 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ZBED6P86452 979 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 TFAMQ00059 246 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 KCNH2Q12809 1159 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 PTPRJQ12913 1337 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 KCNC3Q14003 757 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 LEXMQ3ZCV2 418 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 PTCRAQ6ISU1 281 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 SPATA31D4Q6ZUB0 917 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ZSCAN30Q86W11 494 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 CD302Q8IX05 232 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 C12orf76Q8N812 135 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 OR8K1Q8NGG5 319 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 FEZF2Q8TBJ5 459 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 SLC22A17Q8WUG5 538 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 PIK3R5Q8WYR1 880 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 SLC35C1Q96A29 364 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 JAKMIP2Q96AA8 810 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 MSLNLQ96KJ4 702 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 EMILIN2Q9BXX0 1053 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 MTMR12Q9C0I1 747 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 VPS16Q9H269 839 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 ASB7Q9H672 318 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 DPP3Q9NY33 737 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 CDH22Q9UJ99 828 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 DERAQ9Y315 318 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 LUC7L2Q9Y383 392 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 C2CD2Q9Y426 696 aa8.16□□□□□ -1.1
SDCBP-206ENST00000519115 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
SDCBP-206ENST00000519115 DOCK8Q8NF50 2099 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 MYO10Q9HD67 2058 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 GRXCR2A6NFK2 248 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SPTLC1O15269 473 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 ARHGAP6O43182 974 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 TEX33O43247 280 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 MBTPS2O43462 519 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 TRAPPC3O43617 180 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 GLUD1P00367 558 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 WEE2P0C1S8 567 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SRGAP2BP0DMP2 458 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 DLATP10515 647 aaKnown RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 BMP1P13497 986 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 CYP3A5P20815 502 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 FGFR3P22607 806 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 CLCN4P51793 760 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 BFSP1Q12934 665 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SMAD4Q13485 552 aaKnown RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SNRNP35Q16560 246 aaKnown RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 EXOC3L4Q17RC7 722 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 VARS2Q5ST30 1063 aaKnown RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 RARS2Q5T160 578 aaKnown RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 C9orf57Q5W0N0 161 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 ANKRD54Q6NXT1 300 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SYCE2Q6PIF2 218 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 GBP6Q6ZN66 633 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 TMC6Q7Z403 805 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 PALB2Q86YC2 1186 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 TMTC1Q8IUR5 882 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 CCDC170Q8IYT3 715 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SMRP1Q8NCR6 262 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 LNX1Q8TBB1 728 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 PARD3BQ8TEW8 1205 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 UBE2Q2Q8WVN8 375 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 CASP10Q92851 521 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 CCDC127Q96BQ5 260 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms