RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 GRAMD1CQ8IYS0 662 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 NKAPQ8N5F7 415 aaKnown RBP6.8□□□□□ -1.32
SQLE-203ENST00000518931 C3orf20Q8ND61 904 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 CACTINQ8WUQ7 758 aaKnown RBP6.8□□□□□ -1.32
SQLE-203ENST00000518931 ANP32BQ92688 251 aaKnown RBP6.8□□□□□ -1.32
SQLE-203ENST00000518931 HPS3Q969F9 1004 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 TRIM63Q969Q1 353 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 MVB12AQ96EY5 273 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 ZNF341Q9BYN7 854 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 VPS11Q9H270 941 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 ZNF768Q9H5H4 540 aaKnown RBP6.8□□□□□ -1.32
SQLE-203ENST00000518931 MAN1C1Q9NR34 630 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 KLHL11Q9NVR0 708 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 TMCC3Q9ULS5 477 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 PHTF1Q9UMS5 762 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 USP15Q9Y4E8 981 aaPredicted RBP6.8□□□□□ -1.32
SQLE-203ENST00000518931 AFG3L2Q9Y4W6 797 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 PCDHA3Q9Y5H8 950 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 GTPBP10A4D1E9 387 aaKnown RBP6.79□□□□□ -1.32
SQLE-203ENST00000518931 ERC2O15083 957 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ZNF185O15231 689 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 GRM6O15303 877 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 PRSS23O95084 383 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ITGB1P05556 798 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 SETSIPP0DME0 302 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ALAS1P13196 640 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 MALP21145 153 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 RXRGP48443 463 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ZNF131P52739 623 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 MTA1Q13330 715 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 SNAPC2Q13487 334 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ZNF267Q14586 743 aaPredicted RBP6.79□□□□□ -1.32
SQLE-203ENST00000518931 LSM12Q3MHD2 195 aaKnown RBP6.79□□□□□ -1.32
SQLE-203ENST00000518931 ATAT1Q5SQI0 421 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 THEMIS2Q5TEJ8 643 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 GDF7Q7Z4P5 450 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 MYLK4Q86YV6 388 aaPredicted RBP6.79□□□□□ -1.32
SQLE-203ENST00000518931 NAXEQ8NCW5 288 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ACRBPQ8NEB7 543 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 IL17REQ8NFR9 667 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 CCDC34Q96HJ3 373 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 MAP3K14Q99558 947 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 TEX101Q9BY14 249 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 TSPY26PQ9H489 355 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 KIAA1586Q9HCI6 787 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 POLHQ9Y253 713 aa6.79□□□□□ -1.32
SQLE-203ENST00000518931 ABHD14A-ACY1A0A1B0GW23 586 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 A6NCN8 305 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 DIRC3C9JPN6 131 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 F5H423 210 aaPredicted RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 J3KRW8 73 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 APAF1O14727 1248 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 RPS6KA4O75676 772 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 AGR2O95994 175 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 FTLP02792 175 aaPredicted RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 MTHFD1P11586 935 aaKnown RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 HSPA6P17066 643 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 TNFRSF1AP19438 455 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 SMARCA1P28370 1054 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 OAS2P29728 719 aaKnown RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 TDO2P48775 406 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 PRKG2Q13237 762 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 TUBA3CQ13748 450 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 GTF2H3Q13889 308 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 PDCD2Q16342 344 aaPredicted RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 PABPC1LQ4VXU2 614 aaKnown RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 PDCD4Q53EL6 469 aaKnown RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 TUBA3EQ6PEY2 450 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 FAM186BQ8IYM0 893 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 ZNF276Q8N554 614 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 FITM2Q8N6M3 262 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 ARL6IP6Q8N6S5 226 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 SPATA5Q8NB90 893 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 IL17RDQ8NFM7 739 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 NLGN4YQ8NFZ3 816 aaPredicted RBP6.78□□□□□ -1.32
SQLE-203ENST00000518931 PPM1MQ96MI6 270 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 NEU1Q99519 415 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 AP1M1Q9BXS5 423 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 SLC2A4RGQ9NR83 387 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 DMTF1Q9Y222 760 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 ATP11BQ9Y2G3 1177 aa6.78□□□□□ -1.32
SQLE-203ENST00000518931 SLC16A6O15403 523 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 CD1AP06126 327 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 MAP2K6P52564 334 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 FAM189BP81408 668 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 CCDC157Q569K6 752 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 AGAP9Q5VTM2 703 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 C1orf122Q6ZSJ8 110 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 NUP133Q8WUM0 1156 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 SLC25A43Q8WUT9 341 aaPredicted RBP6.77□□□□□ -1.33
SQLE-203ENST00000518931 RGMAQ96B86 450 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 CLIP3Q96DZ5 547 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 C1GALT1C1Q96EU7 318 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 AIFM3Q96NN9 605 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 MYD88Q99836 296 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 REXO4Q9GZR2 422 aaKnown RBP6.77□□□□□ -1.33
SQLE-203ENST00000518931 FAM50BQ9Y247 325 aa6.77□□□□□ -1.33
SQLE-203ENST00000518931 REXO2Q9Y3B8 237 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms