RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 THPOP40225 353 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 GFRA1P56159 465 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 RRP1P56182 461 aaKnown RBP7.09□□□□□ -1.27
CCDC6-203ENST00000518638 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 KIAA0753Q2KHM9 967 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 TCTN1Q2MV58 587 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 TRIM71Q2Q1W2 868 aaKnown RBP7.09□□□□□ -1.27
CCDC6-203ENST00000518638 MTERF2Q49AM1 385 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 SERINC5Q86VE9 423 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 FTSJ3Q8IY81 847 aaKnown RBP7.09□□□□□ -1.27
CCDC6-203ENST00000518638 PPTC7Q8NI37 304 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 KAT2BQ92831 832 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 FRAT1Q92837 279 aaPredicted RBP7.09□□□□□ -1.27
CCDC6-203ENST00000518638 RPGRIP1Q96KN7 1286 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 SIGLEC10Q96LC7 697 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 INCENPQ9NQS7 918 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 SNTG2Q9NY99 539 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 IMPACTQ9P2X3 320 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 SORCS3Q9UPU3 1222 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 IRAK3Q9Y616 596 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 NPHP3-ACAD11A0A0J9YXS1 232 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 GRM6O15303 877 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 LINC01565O15544 149 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 CPP00450 1065 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 PLS3P13797 630 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 PNLIPP16233 465 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 GALK1P51570 392 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 CLCN5P51795 746 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 CORO7P57737 925 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 RPS6P62753 249 aaKnown RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 UBE3AQ05086 875 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 ARHGAP1Q07960 439 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 BTG3Q14201 252 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 HSP90AA2PQ14568 343 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 STXBP2Q15833 593 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 CCDC96Q2M329 555 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 CCDC62Q6P9F0 684 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 KCNV1Q6PIU1 500 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 BTNL9Q6UXG8 535 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 SLC30A10Q6XR72 485 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 FAM43BQ6ZT52 329 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 KCTD1Q719H9 257 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 SPATC1Q76KD6 591 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 TMEM57Q8N5G2 664 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 NUP43Q8NFH3 380 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 FRS2Q8WU20 508 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 DACT3Q96B18 629 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 NEK1Q96PY6 1258 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 STRBPQ96SI9 672 aaKnown RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 IWS1Q96ST2 819 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 ALG1Q9BT22 464 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 MFSD1Q9H3U5 465 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 GPRC5CQ9NQ84 441 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 CLEC1BQ9P126 229 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 STX8Q9UNK0 236 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 EXOC6BQ9Y2D4 811 aa7.08□□□□□ -1.28
CCDC6-203ENST00000518638 DDX49Q9Y6V7 483 aaKnown RBP7.08□□□□□ -1.28
CCDC6-203ENST00000518638 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 MED19A0JLT2 244 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 C17orf102A2RUQ5 167 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 FAM221BA6H8Z2 402 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 TSPY2A6NKD2 308 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 GSG1L2A8MUP6 293 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 RAB11FIP3O75154 756 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 HMMRO75330 724 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 PPFIA4O75335 1185 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 APPP05067 770 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 RPLP2P05387 115 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ZFYP08048 801 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 PRKCAP17252 672 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ECI1P42126 302 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 GRIA2P42262 883 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 SF1Q15637 639 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 SYDE2Q5VT97 1194 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ZC3H14Q6PJT7 736 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 CHST3Q7LGC8 479 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 FRMD5Q7Z6J6 570 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ITPRIPQ8IWB1 547 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 CMTR2Q8IYT2 770 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ZDHHC14Q8IZN3 488 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 KREMEN2Q8NCW0 462 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 PANK1Q8TE04 598 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 NSUN6Q8TEA1 469 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 SUSD6Q92537 303 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 APPBP2Q92624 585 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ATP6V0A1Q93050 837 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 C1orf159Q96HA4 380 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 SRPK1Q96SB4 655 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 AARSD1Q9BTE6 412 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 SPATA9Q9BWV2 254 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 PUS7LQ9H0K6 701 aaKnown RBP7.07□□□□□ -1.28
CCDC6-203ENST00000518638 BOLA2Q9H3K6 86 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 IL1RAPL2Q9NP60 686 aa7.07□□□□□ -1.28
CCDC6-203ENST00000518638 ARHGEF4Q9NR80 690 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms