RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 AFF4Q9UHB7 1163 aaKnown RBP23.62■■□□□ 1.37
VEGFA-217ENST00000518538 CDH22Q9UJ99 828 aa23.62■■□□□ 1.37
VEGFA-217ENST00000518538 MAFFQ9ULX9 164 aa23.62■■□□□ 1.37
VEGFA-217ENST00000518538 SPTBN5Q9NRC6 3674 aaKnown RBP23.62■■□□□ 1.37
VEGFA-217ENST00000518538 MTCL1Q9Y4B5 1905 aaKnown RBP23.62■■□□□ 1.37
VEGFA-217ENST00000518538 VNN1O95497 513 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 HNRNPA1P09651 372 aaKnown RBP eCLIP23.61■■□□□ 1.37
VEGFA-217ENST00000518538 WEE2P0C1S8 567 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 GPR17Q13304 367 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 SOWAHAQ2M3V2 549 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 PPM1LQ5SGD2 360 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 ATAT1Q5SQI0 421 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 LIMS2Q7Z4I7 341 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 OR10T2Q8NGX3 314 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 XYLT2Q9H1B5 865 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 VRTNQ9H8Y1 702 aa23.61■■□□□ 1.37
VEGFA-217ENST00000518538 OR4Q2P0C623 313 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 ELF1P32519 619 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 GTF2H1P32780 548 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 STX17P56962 302 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 PPP3CAQ08209 521 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 RNF19BQ6ZMZ0 732 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 FILIP1Q7Z7B0 1213 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 ADHFE1Q8IWW8 467 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 ADGRF2Q8IZF7 708 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 FEZF2Q8TBJ5 459 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 ZNF707Q96C28 371 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-217ENST00000518538 TMEM209Q96SK2 561 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 UHRF1Q96T88 793 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-217ENST00000518538 PRKD2Q9BZL6 878 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 ZCWPW1Q9H0M4 648 aa23.6■■□□□ 1.37
VEGFA-217ENST00000518538 STX10O60499 249 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 GCLMP48507 274 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 LHX1P48742 406 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 TNNC1P63316 161 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 ADCY1Q08828 1119 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 ZNF699Q32M78 642 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 WDR72Q3MJ13 1102 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 TCEAL8Q8IYN2 117 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 SMG7Q92540 1137 aaKnown RBP23.59■■□□□ 1.37
VEGFA-217ENST00000518538 MMS19Q96T76 1030 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 PHF7Q9BWX1 381 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-217ENST00000518538 POMKQ9H5K3 350 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 METTL14Q9HCE5 456 aaKnown RBP23.59■■□□□ 1.37
VEGFA-217ENST00000518538 TMEM8AQ9HCN3 771 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 DDX43Q9NXZ2 648 aaKnown RBP23.59■■□□□ 1.37
VEGFA-217ENST00000518538 ARMCX3Q9UH62 379 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-217ENST00000518538 RWDD2AQ9UIY3 292 aa23.59■■□□□ 1.37
VEGFA-217ENST00000518538 TCF20Q9UGU0 1960 aaKnown RBP23.59■■□□□ 1.37
VEGFA-217ENST00000518538 PRRG1O14668 218 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 GABRDO14764 452 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 POU2F2P09086 479 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 PIK3CAP42336 1068 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 MYL7Q01449 175 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 ZP2Q05996 745 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 SGSM1Q2NKQ1 1148 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 RBM43Q6ZSC3 357 aaKnown RBP23.58■■□□□ 1.37
VEGFA-217ENST00000518538 NECAB3Q96P71 396 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-217ENST00000518538 ACBD6Q9BR61 282 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 COL25A1Q9BXS0 654 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-217ENST00000518538 CYP4F11Q9HBI6 524 aa23.58■■□□□ 1.37
VEGFA-217ENST00000518538 SEC24AO95486 1093 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 HLA-DRAP01903 254 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 FAM163BP0C2L3 166 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 WARSP23381 471 aaKnown RBP23.57■■□□□ 1.36
VEGFA-217ENST00000518538 NLRP12P59046 1061 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 DPCR1Q3MIW9 517 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 DCAF17Q5H9S7 520 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-217ENST00000518538 ZNF667Q5HYK9 610 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 KRT39Q6A163 491 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 FRMD5Q7Z6J6 570 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 OSTM1Q86WC4 334 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 KBTBD7Q8WVZ9 684 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 TAF4BQ92750 862 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 PGLYRP2Q96PD5 576 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 MMRN2Q9H8L6 949 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 PIDD1Q9HB75 910 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 INSL5Q9Y5Q6 135 aa23.57■■□□□ 1.36
VEGFA-217ENST00000518538 MTMR11A4FU01 709 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 CCL16O15467 120 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 XYLBO75191 536 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 TACC1O75410 805 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 CLSTN1O94985 981 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 VNN2O95498 520 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 FGFR1OPO95684 399 aaKnown RBP23.56■■□□□ 1.36
VEGFA-217ENST00000518538 PCSK1P29120 753 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 TSPY1Q01534 308 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 SMARCB1Q12824 385 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 CCDC40Q4G0X9 1142 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 TCERG1LQ5VWI1 586 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 DCP1BQ8IZD4 617 aaKnown RBP23.56■■□□□ 1.36
VEGFA-217ENST00000518538 HSFX1Q9UBD0 423 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 NXF1Q9UBU9 619 aaKnown RBP23.56■■□□□ 1.36
VEGFA-217ENST00000518538 DACH1Q9UI36 760 aa23.56■■□□□ 1.36
VEGFA-217ENST00000518538 GNA14O95837 355 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 ASS1P00966 412 aaKnown RBP23.55■■□□□ 1.36
VEGFA-217ENST00000518538 LRG1P02750 347 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 MXI1P50539 228 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 SLC39A12Q504Y0 691 aa23.55■■□□□ 1.36
VEGFA-217ENST00000518538 INTS6LQ5JSJ4 861 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms