RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 TRIM71Q2Q1W2 868 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 VWA3BQ502W6 1294 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 DCAF12L1Q5VU92 463 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 RAP1GAP2Q684P5 730 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 LMBRD2Q68DH5 695 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 NFRKBQ6P4R8 1299 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CRTC1Q6UUV9 634 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 RRAGAQ7L523 313 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 TAS1R1Q7RTX1 841 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ZSCAN30Q86W11 494 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 SNX32Q86XE0 403 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 FAM126BQ8IXS8 530 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 MPP5Q8N3R9 675 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PCSK9Q8NBP7 692 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PIK3C3Q8NEB9 887 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 OR6Y1Q8NGX8 325 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CEP70Q8NHQ1 597 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 BCL7CQ8WUZ0 217 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ZNF480Q8WV37 535 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ASB11Q8WXH4 323 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PEX11GQ96HA9 241 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 HRASLS5Q96KN8 279 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 RTKNQ9BST9 563 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 TWSG1Q9GZX9 223 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PCDHAC1Q9H158 963 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PRDM13Q9H4Q3 707 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 TAF1DQ9H5J8 278 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 RETREG1Q9H6L5 497 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 LRRC4CQ9HCJ2 640 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 HEYLQ9NQ87 328 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PRDM8Q9NQV8 689 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 TMEM140Q9NV12 185 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 MRGBPQ9NV56 204 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 USP40Q9NVE5 1235 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 HSPBP1Q9NZL4 362 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 STOML1Q9UBI4 398 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 VPS28Q9UK41 221 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 AJAP1Q9UKB5 411 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 FER1L4A9Z1Z3 1794 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 A0A087WWL8 130 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 F8W031 263 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 H0Y3Z8 333 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 H0Y858 1186 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SPTLC2O15270 562 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ADCY6O43306 1168 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 DNPH1O43598 174 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 PTP4A3O75365 173 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 DNAJB5O75953 348 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SGPL1O95470 568 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 GLP2RO95838 553 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 EFEMP2O95967 443 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 HSP90AB1P08238 724 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CNPP09543 421 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CSF1P09603 554 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SBK3P0C264 359 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 GAAP10253 952 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CKBP12277 381 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 PECAM1P16284 738 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 GUCY1A2P33402 732 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SLC11A2P49281 568 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CCR9P51686 369 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 BCAT1P54687 386 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 NOMO3P69849 1222 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CHRNEQ04844 493 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 EIF4A2Q14240 407 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 PSMD6Q15008 389 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 TARBP2Q15633 366 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SMAD1Q15797 465 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SKIDA1Q1XH10 827 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CCDC92Q53HC0 331 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 RALGPS1Q5JS13 557 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 UBXN11Q5T124 520 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ATPAF1Q5TC12 328 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ATG16L1Q676U5 607 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 RNF43Q68DV7 783 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 VASNQ6EMK4 673 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 GRAMD4Q6IC98 578 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 USP17L6PQ6QN14 398 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ZDHHC24Q6UX98 284 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 LIPIQ6XZB0 460 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 PRR23CQ6ZRP0 262 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 TMTC3Q6ZXV5 915 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 R3HCC1LQ7Z5L2 792 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 KRT73Q86Y46 540 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 YAF2Q8IY57 180 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 UNC5BQ8IZJ1 945 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 TMEM57Q8N5G2 664 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 NGEFQ8N5V2 710 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SLC15A4Q8N697 577 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 LILRA3Q8N6C8 439 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 DNAJC5GQ8N7S2 189 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CCDC191Q8NCU4 936 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 FBXO18Q8NFZ0 1043 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CREB3L4Q8TEY5 395 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CASKIN2Q8WXE0 1202 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 STON2Q8WXE9 905 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ATP6V1E2Q96A05 226 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SPSB4Q96A44 273 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 NSUN4Q96CB9 384 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 RADILQ96JH8 1075 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms