RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TNS3Q68CZ2 1445 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 EIF4E1BA6NMX2 242 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 PMPCBO75439 489 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 PDHA1P08559 390 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 AP2B1P63010 937 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 FRMD5Q7Z6J6 570 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 NSUN4Q96CB9 384 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 HDAC6Q9UBN7 1215 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 ARHGEF9O43307 516 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 ADCY3O60266 1144 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CYP2C19P33261 490 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CCDC142Q17RM4 750 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 ZC2HC1CQ53FD0 456 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CLEC4FQ8N1N0 589 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 FAM151AQ8WW52 585 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 NCF1BA6NI72 391 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 LRRIQ3A6PVS8 624 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 NCF1CA8MVU1 366 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 NCF1P14598 390 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 TOMM20Q15388 145 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 TAAR1Q96RJ0 339 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 PCMTD2Q9NV79 361 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 PRMT7Q9NVM4 692 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 NDOR1Q9UHB4 597 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CLASP2O75122 1294 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 MYL2P10916 166 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 TNNI3P19429 210 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 PLIN5Q00G26 463 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 KAT2BQ92831 832 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 MAGED4Q96JG8 741 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 LIMA1Q9UHB6 759 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 RRP15Q9Y3B9 282 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 TBKBP1A7MCY6 615 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 STX7O15400 261 aaKnown RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 FGFR1P11362 822 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ENO3P13929 434 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 PTPN7P35236 360 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 NCKAP1LP55160 1127 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 HDAC4P56524 1084 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ZC3H7BQ9UGR2 993 aaKnown RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 PLA2G4CQ9UP65 541 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 MAP3K4Q9Y6R4 1608 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 RGL2O15211 777 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 AP1G2O75843 785 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 GTF2H1P32780 548 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 GPC1P35052 558 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 TRADDQ15628 312 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 FBXO16Q8IX29 292 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 SENP2Q9HC62 589 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 PRR23D1E9PI22 279 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 F8W810 466 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 PRR23D2P0DMB1 279 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 POU4F1Q01851 419 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 RGL4Q8IZJ4 473 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 KIAA0391O15091 583 aaKnown RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 CHI3L1P36222 383 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 KDSRQ06136 332 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 VPS72Q15906 364 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 GPAT2Q6NUI2 795 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 CCDC33Q8N5R6 958 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 FAM136AQ96C01 138 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 RPS6KB2Q9UBS0 482 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 WDR47O94967 919 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 HLA-DRAP01903 254 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 PCNAP12004 261 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 GPD1P21695 349 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 C16orf72Q14CZ0 275 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 MARCOQ9UEW3 520 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 SYNMO15061 1565 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 M0QYT0 321 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ENTPD3O75355 529 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 CYP7B1O75881 506 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 GYS2P54840 703 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 INPP5AQ14642 412 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 CSGALNACT1Q8TDX6 532 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 RFFLQ8WZ73 363 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 NDEL1Q9GZM8 345 aa11.5□□□□□ -0.57
TRIM41-209ENST00000515834 ACTR5Q9H9F9 607 aaPredicted RBP11.5□□□□□ -0.57
TRIM41-209ENST00000515834 RASSF9O75901 435 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 EGFRP00533 1210 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 EPHB2P29323 1055 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 TRIM60Q495X7 471 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 EFHC1Q5JVL4 640 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 CAMKK1Q8N5S9 505 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 AKAP10O43572 662 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 CAND2O75155 1236 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 TCN1P20061 433 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 ACO1P21399 889 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms