RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DNAJB2P25686 324 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 CTNNB1P35222 781 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 PBX2P40425 430 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 PBX3P40426 434 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 BRCC3P46736 316 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 LHX1P48742 406 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 USP41Q3LFD5 358 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 BAP1Q92560 729 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 NUCKS1Q9H1E3 243 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 CHD7Q9P2D1 2997 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 IMPACTQ9P2X3 320 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 NXF1Q9UBU9 619 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 BARX2Q9UMQ3 279 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 IRAK3Q9Y616 596 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 H3BNC9 293 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 TBC1D4O60343 1298 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 CILPO75339 1184 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 FOSL2P15408 326 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 ZNF132P52740 706 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 POLR2FP61218 127 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 ZBED6P86452 979 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 APBA1Q02410 837 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 DSG1Q02413 1049 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 LRMPQ12912 555 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 FAM171A1Q5VUB5 890 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 KIAA0319Q5VV43 1072 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 PDE12Q6L8Q7 609 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 ANKS3Q6ZW76 656 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 RRAGAQ7L523 313 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 FAM71AQ8IYT1 594 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 KLHL23Q8NBE8 558 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 HASPINQ8TF76 798 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 PIK3R5Q8WYR1 880 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 MMS19Q96T76 1030 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 ARID3AQ99856 593 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 TTPALQ9BTX7 342 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 SDCBP2Q9H190 292 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 SMYD3Q9H7B4 428 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 SLC28A3Q9HAS3 691 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 AJAP1Q9UKB5 411 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 SSX2IPQ9Y2D8 614 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 BACE2Q9Y5Z0 518 aa12.8□□□□□ -0.36
PDLIM5-220ENST00000514830 F8VZ95 297 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 H7C4K7 107 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 I3L4J1 428 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 LILRB3O75022 631 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 C1RP00736 705 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 PAEPP09466 180 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 CTSAP10619 480 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 TKTP29401 623 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 HNRNPH3P31942 346 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 GLUD2P49448 558 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 CREMQ03060 361 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 DRAP1Q14919 205 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 GJB7Q6PEY0 223 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 CACNA2D4Q7Z3S7 1137 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 CRYBG2Q8N1P7 616 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 ZNF397Q8NF99 534 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 SPPL3Q8TCT6 385 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 KAT5Q92993 513 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 TIFAQ96CG3 184 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 PDLIM2Q96JY6 352 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 MRPL45Q9BRJ2 306 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 DNAI2Q9GZS0 605 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 LMAN2LQ9H0V9 348 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 ZBP1Q9H171 429 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 PRDM6Q9NQX0 595 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 AIPL1Q9NZN9 384 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 KIAA1257Q9ULG3 409 aa12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 LUC7L2Q9Y383 392 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 MTCL1Q9Y4B5 1905 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-220ENST00000514830 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 FOXN3O00409 490 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 FSCN2O14926 492 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 TPM1P09493 284 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 WEE2P0C1S8 567 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 PCSK1P29120 753 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 SOX5P35711 763 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 GNL1P36915 607 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 STAT1P42224 750 aa12.78□□□□□ -0.36
PDLIM5-220ENST00000514830 CDH8P55286 799 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms