RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	TRAPPC12	Q8WVT3	735 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	BSND	Q8WZ55	320 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	KIFAP3	Q92845	792 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	IQCD	Q96DY2	449 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	PPP1R13B	Q96KQ4	1090 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	C16orf45	Q96MC5	204 aa	Predicted RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	DNAJC7	Q99615	494 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	TMEM175	Q9BSA9	504 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	TTYH3	Q9C0H2	523 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	GBP3	Q9H0R5	595 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	POLR3F	Q9H1D9	316 aa	Predicted RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	ST6GALNAC4	Q9H4F1	302 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	ALG2	Q9H553	416 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	TMEM206	Q9H813	350 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	MMRN2	Q9H8L6	949 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	TBC1D17	Q9HA65	648 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	METTL14	Q9HCE5	456 aa	Known RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	WDR6	Q9NNW5	1121 aa	Known RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	SLC2A4RG	Q9NR83	387 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	FAM207A	Q9NSI2	230 aa	Predicted RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	DMAC2	Q9NW81	257 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	ARMCX3	Q9UH62	379 aa	Predicted RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	RAB23	Q9ULC3	237 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	LUC7L2	Q9Y383	392 aa	Known RBP	7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	C2orf16	Q68DN1	1984 aa		7.22	□□□□□ -1.25
RACK1-231	ENST00000514183	CNTNAP2	Q9UHC6	1331 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183		A0A1W2PQJ5	194 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	EPHB6	O15197	1021 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	ZSCAN12	O43309	604 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	LAMTOR5	O43504	91 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	ZNF623	O75123	536 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	C22orf31	O95567	290 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	AFP	P02771	609 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	UROD	P06132	367 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	SP9	P0CG40	484 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	DARS	P14868	501 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	EPCAM	P16422	314 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	PSMC2	P35998	433 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	CASP4	P49662	377 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	SMTN	P53814	917 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	ZBED6	P86452	979 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	GTF2B	Q00403	316 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	PRKCQ	Q04759	706 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	PPP2R3A	Q06190	1150 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	DMP1	Q13316	513 aa	Predicted RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	MTF1	Q14872	753 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	EMC2	Q15006	297 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	PTPN14	Q15678	1187 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	FIGN	Q5HY92	759 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	NOMO2	Q5JPE7	1267 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	EFCAB12	Q6NXP0	572 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	DCLRE1A	Q6PJP8	1040 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	RAD9B	Q6WBX8	426 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	MTSS1L	Q765P7	747 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	HAUS6	Q7Z4H7	955 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	ZNF598	Q86UK7	904 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	RETREG3	Q86VR2	466 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	TMTC1	Q8IUR5	882 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	FAM186B	Q8IYM0	893 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	SLC44A3	Q8N4M1	653 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	ZNF397	Q8NF99	534 aa	Predicted RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	OR8K1	Q8NGG5	319 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	HELQ	Q8TDG4	1101 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	TMEM40	Q8WWA1	233 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	HVCN1	Q96D96	273 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	DESI2	Q9BSY9	194 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	IER2	Q9BTL4	223 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	KIFC3	Q9BVG8	833 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	LSM14B	Q9BX40	385 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	NIFK	Q9BYG3	293 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	C17orf75	Q9HAS0	396 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	PIDD1	Q9HB75	910 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	KMT5A	Q9NQR1	393 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	XPNPEP1	Q9NQW7	623 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	ARHGEF3	Q9NR81	526 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	GMEB2	Q9UKD1	530 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	EXOC7	Q9UPT5	735 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	MRPS17	Q9Y2R5	130 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	PPP2R2C	Q9Y2T4	447 aa		7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.21	□□□□□ -1.25
RACK1-231	ENST00000514183	NCOR2	Q9Y618	2525 aa		7.21	□□□□□ -1.26
RACK1-231	ENST00000514183	CCDC195	A0A1B0GUA6	201 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	TISP43	B9A030	160 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	EXOC3	O60645	756 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	LRP3	O75074	770 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	GLUD1	P00367	558 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	VTN	P04004	478 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	GALT	P07902	379 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	TNNT1	P13805	278 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	PHKA2	P46019	1235 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	CLCN4	P51793	760 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	STARD6	P59095	220 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	NCBP1	Q09161	790 aa	Known RBP	7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	KCNMA1	Q12791	1236 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	KCNH2	Q12809	1159 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	MYBPC2	Q14324	1141 aa		7.2	□□□□□ -1.26
RACK1-231	ENST00000514183	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.2	□□□□□ -1.26	5e-9	■□□□□ 9.5
RACK1-231	ENST00000514183	ST3GAL2	Q16842	350 aa		7.2	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms