RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 KBTBD7Q8WVZ9 684 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 KLHL5Q96PQ7 755 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 MMS19Q96T76 1030 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 BPIFA3Q9BQP9 254 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 RTP3Q9BQQ7 232 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 NAT10Q9H0A0 1025 aaKnown RBP10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 VPS16Q9H269 839 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 TSPY26PQ9H489 355 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 TLE6Q9H808 572 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 NGRNQ9NPE2 291 aaKnown RBP10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 CDY1Q9Y6F8 540 aa10.52□□□□□ -0.73
TOPBP1-209ENST00000513818 BECN2A8MW95 431 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 HUS1O60921 280 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 CLASP2O75122 1294 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 SPATA31D3P0C874 917 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 EPCAMP16422 314 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 ZNF18P17022 549 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 CD58P19256 250 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 ASPAP45381 313 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 YWHAHQ04917 246 aaPredicted RBP10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 SKIV2LQ15477 1246 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 DUSP6Q16828 381 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 SOWAHAQ2M3V2 549 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 VWA3BQ502W6 1294 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 ZNF667Q5HYK9 610 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 MIIPQ5JXC2 388 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 OVOS1Q6IE37 1185 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 EP400NLQ6ZTU2 488 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 PALB2Q86YC2 1186 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 FBXL13Q8NEE6 735 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 FEZF2Q8TBJ5 459 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 KAT5Q92993 513 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 TATDN2Q93075 761 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 CLSTN3Q9BQT9 956 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 TUBGCP2Q9BSJ2 902 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 INTS2Q9H0H0 1204 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 PRDM6Q9NQX0 595 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 GDAP2Q9NXN4 497 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 GCNT4Q9P109 453 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 HMGXB4Q9UGU5 601 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 FBXL5Q9UKA1 691 aa10.51□□□□□ -0.73
TOPBP1-209ENST00000513818 STAU1O95793 577 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 GLP2RO95838 553 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 CYP11A1P05108 521 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 WEE2P0C1S8 567 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 CPB1P15086 417 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 TYMPP19971 482 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 EEF1GP26641 437 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 KLRC2P26717 231 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 ATICP31939 592 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 OR1D2P34982 312 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 KLK7P49862 253 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 COPB1P53618 953 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 ZNF445P59923 1031 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 MCCD1P59942 119 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 ROR1Q01973 937 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 SGSM1Q2NKQ1 1148 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 GJB7Q6PEY0 223 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 ANKS3Q6ZW76 656 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 APTXQ7Z2E3 356 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 METTL23Q86XA0 190 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 TOP6BLQ8N6T0 577 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 MAFAQ8NHW3 353 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 APOL5Q9BWW9 433 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 EMILIN2Q9BXX0 1053 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 IMPG2Q9BZV3 1241 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 NIF3L1Q9GZT8 377 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 NDST4Q9H3R1 872 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 DPEP3Q9H4B8 488 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 RXFP1Q9HBX9 757 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 DDX43Q9NXZ2 648 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 AJAP1Q9UKB5 411 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 BARX2Q9UMQ3 279 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
TOPBP1-209ENST00000513818 WDR27A2RRH5 827 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 TBC1D4O60343 1298 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 N4BP1O75113 896 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 ATP2C2O75185 946 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 TBX10O75333 385 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 ADH1AP07327 375 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 PDGFRBP09619 1106 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC9A1P19634 815 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 POU3F3P20264 500 aaPredicted RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 CDK11BP21127 795 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms