RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SMIM28A0A1B0GU29 152 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 PIRO00625 290 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 TRIM66O15016 1216 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 AXIN1O15169 862 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 MED7O43513 233 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 SGPL1O95470 568 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 MYCP01106 439 aaPredicted RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 FTLP02792 175 aaPredicted RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 RPL9P32969 192 aaKnown RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 GALCP54803 685 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 FAM189BP81408 668 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 BFSP2Q13515 415 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 STILQ15468 1287 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 TRIM71Q2Q1W2 868 aaKnown RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 ZNF699Q32M78 642 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 FBXO47Q5MNV8 452 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 C1orf53Q5VUE5 145 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 SLC47A2Q86VL8 602 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 FAM228AQ86W67 206 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 UNC93AQ86WB7 457 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 CDR2LQ86X02 465 aaPredicted RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 GLYCTKQ8IVS8 523 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 TMEM192Q8IY95 271 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 UBR7Q8N806 425 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 CEP120Q8N960 986 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 MYRIPQ8NFW9 859 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 ZNF606Q8WXB4 792 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 CTNNBL1Q8WYA6 563 aaPredicted RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 HPDLQ96IR7 371 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 ZNF333Q96JL9 665 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 SNX27Q96L92 541 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 TOX2Q96NM4 488 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 PI4K2AQ9BTU6 479 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 LHX5Q9H2C1 402 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 FAM105AQ9NUU6 356 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 GDAP2Q9NXN4 497 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 CDC23Q9UJX2 597 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 NOCTQ9UK39 431 aaKnown RBP10.55□□□□□ -0.72
TPM3-221ENST00000513769 IPPQ9Y573 584 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 PCDHB4Q9Y5E5 795 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 PCDHGC5Q9Y5F6 944 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 PTCH2Q9Y6C5 1203 aa10.55□□□□□ -0.72
TPM3-221ENST00000513769 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 CES2O00748 559 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 CYP1A1P04798 512 aaPredicted RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 ITGB3P05106 788 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 KRT19P08727 400 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 ITGA4P13612 1032 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 KRT5P13647 590 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 CHRNB2P17787 502 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 FGFR4P22455 802 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 LRPAP1P30533 357 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 ZNF132P52740 706 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 DSC3Q14574 896 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 CTC1Q2NKJ3 1217 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 LMBRD2Q68DH5 695 aaPredicted RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 SLFN11Q7Z7L1 901 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 NOP9Q86U38 636 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 RPUSD2Q8IZ73 545 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 LNX1Q8TBB1 728 aaPredicted RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 KAT5Q92993 513 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 RPGRIP1Q96KN7 1286 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 WDR24Q96S15 920 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 PPP1R16BQ96T49 567 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 ERVK-5Q9HDB9 667 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 RGS18Q9NS28 235 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 CISHQ9NSE2 258 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 UVRAGQ9P2Y5 699 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 SIX4Q9UIU6 781 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 PADI3Q9ULW8 664 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 AGAP1Q9UPQ3 857 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 SAR1BQ9Y6B6 198 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 DUSP10Q9Y6W6 482 aa10.54□□□□□ -0.72
TPM3-221ENST00000513769 TRIP12Q14669 1992 aaPredicted RBP10.54□□□□□ -0.72
TPM3-221ENST00000513769 KIAA0100Q14667 2235 aaKnown RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 J3QL48 77 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 TLR3O15455 904 aaKnown RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 MEFVO15553 781 aaPredicted RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 URI1O94763 535 aaPredicted RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 MTA2O94776 668 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 SLU7O95391 586 aaKnown RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 ABL1P00519 1130 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 THP07101 528 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 NFICP08651 508 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 CKBP12277 381 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 TCP1P17987 556 aaKnown RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 CDH5P33151 784 aaPredicted RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 NAP1L1P55209 391 aaKnown RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 SNX16P57768 344 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 FMO1Q01740 532 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms