RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 ING5Q8WYH8 240 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 NKD2Q969F2 451 aaPredicted RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 ZNF560Q96MR9 790 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 KXD1Q9BQD3 176 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 DDX23Q9BUQ8 820 aaKnown RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 SLITRK6Q9H5Y7 841 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 BRD9Q9H8M2 597 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 MAGEF1Q9HAY2 307 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 TRPV4Q9HBA0 871 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 TRPV5Q9NQA5 729 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 KBTBD4Q9NVX7 518 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 FAM13BQ9NYF5 915 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 SLC27A5Q9Y2P5 690 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 F5P12259 2224 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 FRYLO94915 3013 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 GVINP1Q7Z2Y8 2422 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 DPYSL4O14531 572 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ZNF263O14978 683 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 SPTLC1O15269 473 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 HUS1O60921 280 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 DCNP07585 359 aaKnown RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 ZSCAN22P10073 491 aaPredicted RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 CEBPBP17676 345 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 WEE1P30291 646 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ME1P48163 572 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 LHX1P48742 406 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 GUCY2FP51841 1108 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 TSPY1Q01534 308 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 KCNA1Q09470 495 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 MYO1EQ12965 1108 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 NFE2Q16621 373 aaPredicted RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 DUOXA2Q1HG44 320 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 SLC39A12Q504Y0 691 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ARHGAP15Q53QZ3 475 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ZC3H14Q6PJT7 736 aaKnown RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 DPH6Q7L8W6 267 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 YAF2Q8IY57 180 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 TMEM86AQ8N2M4 240 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 LRRC52Q8N7C0 313 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ATAD1Q8NBU5 361 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 PJA1Q8NG27 643 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ZSCAN18Q8TBC5 510 aaPredicted RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 SPATA18Q8TC71 538 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 FAM200AQ8TCP9 573 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 SPPL2BQ8TCT7 592 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 DEPDC1BQ8WUY9 529 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 DNASE1L2Q92874 299 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 PSMG2Q969U7 264 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 TCEAL4Q96EI5 215 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 PGLYRP2Q96PD5 576 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 C7orf25Q9BPX7 421 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ACBD6Q9BR61 282 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 ZCWPW1Q9H0M4 648 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 FAM86C1Q9NVL1 165 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 RBAKQ9NYW8 714 aaPredicted RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 CGNQ9P2M7 1197 aaKnown RBP7.87□□□□□ -1.15
HTT-212ENST00000513639 ITGA11Q9UKX5 1188 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 AGAP1Q9UPQ3 857 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 YIPF1Q9Y548 306 aa7.87□□□□□ -1.15
HTT-212ENST00000513639 TRIP11Q15643 1979 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 PVALEFA0A1B0GWK0 134 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 MTMR11A4FU01 709 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 TISP43B9A030 160 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 PPEF2O14830 753 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 EIF3DO15371 548 aaKnown RBP eCLIP7.86□□□□□ -1.15
HTT-212ENST00000513639 POLR2DO15514 142 aaKnown RBP7.86□□□□□ -1.15
HTT-212ENST00000513639 LAMTOR5O43504 91 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 PRPF40AO75400 957 aaKnown RBP7.86□□□□□ -1.15
HTT-212ENST00000513639 PRPF6O94906 941 aaKnown RBP7.86□□□□□ -1.15
HTT-212ENST00000513639 TNNC2P02585 160 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 FAM163BP0C2L3 166 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 OR4Q2P0C623 313 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 CDC25CP30307 473 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 CCR2P41597 374 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 RPS9P46781 194 aaKnown RBP7.86□□□□□ -1.15
HTT-212ENST00000513639 MYL7Q01449 175 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 PPP2R5DQ14738 602 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 UBXN2BQ14CS0 331 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 TEAD2Q15562 447 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 ZNF528Q3MIS6 628 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 MGAT5BQ3V5L5 792 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 WSCD1Q658N2 575 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 MAMSTRQ6ZN01 415 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 HS2ST1Q7LGA3 356 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 FRMD5Q7Z6J6 570 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 GPD1LQ8N335 351 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 ST13P5Q8NFI4 369 aaPredicted RBP7.86□□□□□ -1.15
HTT-212ENST00000513639 ZNF507Q8TCN5 953 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 CSGALNACT1Q8TDX6 532 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 CLDN23Q96B33 292 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 DHX58Q96C10 678 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 SAAL1Q96ER3 474 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 ANKRD36BP1Q96IX9 119 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 ZSWIM3Q96MP5 696 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 GCNAQ96QF7 691 aa7.86□□□□□ -1.15
HTT-212ENST00000513639 PLA2G2FQ9BZM2 168 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms