RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 CNGA2Q16280 664 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 BEAN1Q3B7T3 259 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 PTCHD3Q3KNS1 767 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 RRAGBQ5VZM2 374 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 TAPT1Q6NXT6 567 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 TSHZ1Q6ZSZ6 1077 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 GDF7Q7Z4P5 450 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 SRGAP1Q7Z6B7 1085 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 GGNQ86UU5 652 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 TMPRSS6Q8IU80 811 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 KRT78Q8N1N4 520 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMAD5-208ENST00000513418 FITM2Q8N6M3 262 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 NLGN4YQ8NFZ3 816 aaPredicted RBP3.6□□□□□ -1.83
SMAD5-208ENST00000513418 RAPGEF4Q8WZA2 1011 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 CCDC136Q96JN2 1154 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 FAM167AQ96KS9 214 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 STRBPQ96SI9 672 aaKnown RBP3.6□□□□□ -1.83
SMAD5-208ENST00000513418 WDCPQ9H6R7 721 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 BRD9Q9H8M2 597 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 FAM204AQ9H8W3 233 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 SACM1LQ9NTJ5 587 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 SRRDQ9UH36 339 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 CDC23Q9UJX2 597 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 TCAF1Q9Y4C2 921 aa3.6□□□□□ -1.83
SMAD5-208ENST00000513418 A0A1W2PPL8 197 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 TRIM43BA6NCK2 446 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 AGPSO00116 658 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 PHGDHO43175 533 aaKnown RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 KRT18P05783 430 aaKnown RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 FTH1P19P0C7X4 201 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 CKBP12277 381 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 BRAFP15056 766 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 KRT4P19013 534 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 MGAT1P26572 445 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 ITPKBP27987 946 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 CRHR2Q13324 411 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 CNGB1Q14028 1251 aaPredicted RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 CYP2A13Q16696 494 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 ATP2B3Q16720 1220 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 HS1BP3Q53T59 392 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 RABL3Q5HYI8 236 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 C10orf62Q5T681 223 aaPredicted RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 DARS2Q6PI48 645 aaKnown RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 RNF207Q6ZRF8 634 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 RHOUQ7L0Q8 258 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 C1orf210Q8IVY1 113 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 MAPKAPK5Q8IW41 473 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 CCAR1Q8IX12 1150 aaKnown RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 SLC15A4Q8N697 577 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 TTC9BQ8N6N2 239 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 DNAJC5GQ8N7S2 189 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 PSD4Q8NDX1 1056 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 PHKBQ93100 1093 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 TRIM43Q96BQ3 446 aaPredicted RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 ZNF503Q96F45 646 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 SLC46A1Q96NT5 459 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 MPHOSPH6Q99547 160 aaKnown RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 GDF15Q99988 308 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 C1QTNF3Q9BXJ4 246 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 TTYH3Q9C0H2 523 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 SARS2Q9NP81 518 aaKnown RBP3.59□□□□□ -1.83
SMAD5-208ENST00000513418 AKIP1Q9NQ31 210 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 ANKFY1Q9P2R3 1169 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 CLCA2Q9UQC9 943 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 DAAM1Q9Y4D1 1078 aa3.59□□□□□ -1.83
SMAD5-208ENST00000513418 LAMC3Q9Y6N6 1575 aa3.59□□□□□ -1.84
SMAD5-208ENST00000513418 FAM234BA2RU67 622 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 POM121BA6NF01 834 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 MUSKO15146 869 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 CYP27B1O15528 508 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 NDUFA10O95299 355 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 CFIP05156 583 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 MYL1P05976 194 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 GRPP07492 148 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 RHOP08100 348 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 ELFN1P0C7U0 828 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 ALAS1P13196 640 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 LILRA4P59901 499 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 CXADRP78310 365 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 FAM193AP78312 1265 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 HLTFQ14527 1009 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMAD5-208ENST00000513418 POLD3Q15054 466 aaPredicted RBP3.58□□□□□ -1.84
SMAD5-208ENST00000513418 HIBCHQ6NVY1 386 aaPredicted RBP3.58□□□□□ -1.84
SMAD5-208ENST00000513418 DBX2Q6ZNG2 339 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 ZNF627Q7L945 461 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 GPR149Q86SP6 731 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 SRLQ86TD4 932 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 MORC1Q86VD1 984 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 PDSS2Q86YH6 399 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 VRK3Q8IV63 474 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 SPICE1Q8N0Z3 855 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 TMEM132CQ8N3T6 1108 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 CPEB3Q8NE35 698 aaKnown RBP3.58□□□□□ -1.84
SMAD5-208ENST00000513418 POC1BQ8TC44 478 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 BRIX1Q8TDN6 353 aaKnown RBP3.58□□□□□ -1.84
SMAD5-208ENST00000513418 LPIN2Q92539 896 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 DVL3Q92997 716 aaPredicted RBP3.58□□□□□ -1.84
SMAD5-208ENST00000513418 TTC17Q96AE7 1141 aa3.58□□□□□ -1.84
SMAD5-208ENST00000513418 TMEM125Q96AQ2 219 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms