RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
HMGCL-209ENST00000513148 SNX9Q9Y5X1 595 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 ODC1P11926 461 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 POU3F3P20264 500 aaPredicted RBP17.68■□□□□ 0.42
HMGCL-209ENST00000513148 NRIP1P48552 1158 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 ENPEPQ07075 957 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 KIAA0319Q5VV43 1072 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 PDE12Q6L8Q7 609 aaKnown RBP17.68■□□□□ 0.42
HMGCL-209ENST00000513148 AOPEPQ8N6M6 819 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
HMGCL-209ENST00000513148 THAP9Q9H5L6 903 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 PCDHB8Q9UN66 801 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 XIRP2A4UGR9 3374 aa17.68■□□□□ 0.42
HMGCL-209ENST00000513148 M0QZQ0 153 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 CYB561D2O14569 222 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 STX10O60499 249 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 CCZ1BP86790 482 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 CCZ1P86791 482 aaPredicted RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 MYL5Q02045 173 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 PSMD5Q16401 504 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 KRT39Q6A163 491 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 C15orf39Q6ZRI6 1047 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 TAS1R2Q8TE23 839 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 TLE6Q9H808 572 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 MAGEC2Q9UBF1 373 aaPredicted RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 SYN3O14994 580 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 HLA-DRAP01903 254 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 CNPP09543 421 aaKnown RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 NOP2P46087 812 aaKnown RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 CLCN6P51797 869 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 IQCB1Q15051 598 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 ZNF699Q32M78 642 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 WDR72Q3MJ13 1102 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 TRIM59Q8IWR1 403 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 LNX1Q8TBB1 728 aaPredicted RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 PPP2R3CQ969Q6 453 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 PI4K2AQ9BTU6 479 aa17.67■□□□□ 0.42
HMGCL-209ENST00000513148 NXF1Q9UBU9 619 aaKnown RBP17.67■□□□□ 0.42
HMGCL-209ENST00000513148 GOLGA6L19H0YKK7 550 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 LRRN2O75325 713 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 GTF2H1P32780 548 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 TNNT3P45378 269 aaPredicted RBP17.66■□□□□ 0.42
HMGCL-209ENST00000513148 SKIV2LQ15477 1246 aaKnown RBP17.66■□□□□ 0.42
HMGCL-209ENST00000513148 TMCO3Q6UWJ1 677 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 FAM114A1Q8IWE2 563 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 APPL2Q8NEU8 664 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 PIK3R5Q8WYR1 880 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 MMS19Q96T76 1030 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 XYLT2Q9H1B5 865 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 SSX2IPQ9Y2D8 614 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 IRAK3Q9Y616 596 aa17.66■□□□□ 0.42
HMGCL-209ENST00000513148 TEX28O15482 410 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 CCP110O43303 1012 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 LILRB3O75022 631 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 MYL7Q01449 175 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 YWHAHQ04917 246 aaPredicted RBP17.65■□□□□ 0.42
HMGCL-209ENST00000513148 WSCD1Q658N2 575 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 SPOPLQ6IQ16 392 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 SCARA5Q6ZMJ2 495 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 EP400NLQ6ZTU2 488 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 ANKS3Q6ZW76 656 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 HUS1O60921 280 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 KLRC2P26717 231 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 FMO5P49326 533 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 MCCD1P59942 119 aaPredicted RBP17.65■□□□□ 0.42
HMGCL-209ENST00000513148 TNNC1P63316 161 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 HYAL1Q12794 435 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 KCNH2Q12809 1159 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 CTXN3Q4LDR2 81 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 OVOS1Q6IE37 1185 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 LLGL2Q6P1M3 1020 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 MAFAQ8NHW3 353 aaPredicted RBP17.65■□□□□ 0.42
HMGCL-209ENST00000513148 KLHL5Q96PQ7 755 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 IMPG2Q9BZV3 1241 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 POLIQ9UNA4 740 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 CDY1Q9Y6F8 540 aa17.65■□□□□ 0.42
HMGCL-209ENST00000513148 PLXNA3P51805 1871 aa17.64■□□□□ 0.42
HMGCL-209ENST00000513148 ADAM12O43184 909 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 PAX3P23760 479 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 ATICP31939 592 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 ARPP19P56211 112 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 ZNF280DQ6N043 979 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 RSPO2Q6UXX9 243 aaPredicted RBP17.64■□□□□ 0.41
HMGCL-209ENST00000513148 FBXL13Q8NEE6 735 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 SEMA4DQ92854 862 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.64■□□□□ 0.41
HMGCL-209ENST00000513148 GDAP2Q9NXN4 497 aa17.64■□□□□ 0.41
HMGCL-209ENST00000513148 MTRRQ9UBK8 725 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms