RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 CALCRLQ16602 461 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 DDR2Q16832 855 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 FAM171A1Q5VUB5 890 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 EEF1DP3Q658K8 133 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 CDCA2Q69YH5 1023 aaPredicted RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 CD300LGQ6UXG3 332 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 CYP26C1Q6V0L0 522 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 CATSPER3Q86XQ3 398 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 NOSTRINQ8IVI9 506 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 DIS3L2Q8IYB7 885 aaKnown RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 MAML2Q8IZL2 1156 aaPredicted RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 NSUN7Q8NE18 718 aaKnown RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 FBXO27Q8NI29 283 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 ITFG1Q8TB96 612 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 LNX1Q8TBB1 728 aaPredicted RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 HDAC7Q8WUI4 952 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 STAMQ92783 540 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 NKD1Q969G9 470 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 PLD4Q96BZ4 506 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 MRGPRX2Q96LB1 330 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 RTP3Q9BQQ7 232 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 KIFC3Q9BVG8 833 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 FZD8Q9H461 694 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 PLEKHA4Q9H4M7 779 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 PDZD7Q9H5P4 517 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 ARHGEF3Q9NR81 526 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 HCFC1R1Q9NWW0 138 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 ZDHHC7Q9NXF8 308 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 ZDHHC3Q9NYG2 299 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 FNIP2Q9P278 1114 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 FBXW11Q9UKB1 542 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 SSX2IPQ9Y2D8 614 aa6.48□□□□□ -1.37
GYPB-213ENST00000513128 MTF2Q9Y483 593 aaPredicted RBP6.48□□□□□ -1.37
GYPB-213ENST00000513128 FAM186AA6NE01 2351 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 RIF1Q5UIP0 2472 aaKnown RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 I3L4J1 428 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 NRG2O14511 850 aaPredicted RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 CCL16O15467 120 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 PDPK1O15530 556 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 C8AP07357 584 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 SP9P0CG40 484 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 XBP1P17861 261 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 LIG1P18858 919 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 CD72P21854 359 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 MCM7P33993 719 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 ID4P47928 161 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 GUCY1B3Q02153 619 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 TUSC3Q13454 348 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 CAMK2GQ13555 558 aaPredicted RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 PSMD5Q16401 504 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 HIF1AQ16665 826 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 ARSHQ5FYA8 562 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 GLRA4Q5JXX5 417 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 SNAP47Q5SQN1 464 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 DCLRE1AQ6PJP8 1040 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 CEP57Q86XR8 500 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 SLITRK4Q8IW52 837 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 RAVER1Q8IY67 606 aaKnown RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 GPR65Q8IYL9 337 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 DCLK2Q8N568 766 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 FGF13Q92913 245 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 GTF3C6Q969F1 213 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 RMDN1Q96DB5 314 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 NAP1L4Q99733 375 aaKnown RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 SLC2A4RGQ9NR83 387 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.47□□□□□ -1.373e-6■■□□□ 13.8
GYPB-213ENST00000513128 ABI2Q9NYB9 513 aaPredicted RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
GYPB-213ENST00000513128 GDAQ9Y2T3 454 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 SIT1Q9Y3P8 196 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 CACNA1IQ9P0X4 2223 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 COL4A2P08572 1712 aa6.47□□□□□ -1.37
GYPB-213ENST00000513128 SF3B1O75533 1304 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■■■■ 43.1
GYPB-213ENST00000513128 PTPRZ1P23471 2315 aaPredicted RBP6.47□□□□□ -1.37
GYPB-213ENST00000513128 DNAH14Q0VDD8 3507 aa6.46□□□□□ -1.37
GYPB-213ENST00000513128 ZMYM2Q9UBW7 1377 aa6.46□□□□□ -1.37
GYPB-213ENST00000513128 GVINP1Q7Z2Y8 2422 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 MED19A0JLT2 244 aaPredicted RBP6.46□□□□□ -1.38
GYPB-213ENST00000513128 SHISA7A6NL88 538 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 MEFVO15553 781 aaPredicted RBP6.46□□□□□ -1.38
GYPB-213ENST00000513128 XYLBO75191 536 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 C1RP00736 705 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 THP07101 528 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 XRCC6P12956 609 aaKnown RBP eCLIP6.46□□□□□ -1.38
GYPB-213ENST00000513128 TFE3P19532 575 aaPredicted RBP6.46□□□□□ -1.38
GYPB-213ENST00000513128 FGFR3P22607 806 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 CES1P23141 567 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 OR1D2P34982 312 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 BRCC3P46736 316 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 CLCNKBP51801 687 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 STARD6P59095 220 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 LMNB2Q03252 620 aa6.46□□□□□ -1.38
GYPB-213ENST00000513128 SOX4Q06945 474 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms