RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 RSPH1Q8WYR4 309 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 ERVK-5Q9HDB9 667 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
RACK1-229ENST00000513027 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 KCNK3O14649 394 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 SRGAP2O75044 1071 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 COL6A1P12109 1028 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 CAPN2P17655 700 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 TAF6P49848 677 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 CAP1Q01518 475 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 SLC4A11Q8NBS3 891 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 HNRNPLLQ8WVV9 542 aaKnown RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 FAM84AQ96KN4 292 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 ZMAT2Q96NC0 199 aaKnown RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.36e-8■□□□□ 10.7
RACK1-229ENST00000513027 ACP6Q9NPH0 428 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 IP6K2Q9UHH9 426 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 RAB21Q9UL25 225 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 COG5Q9UP83 839 aa13.18□□□□□ -0.3
RACK1-229ENST00000513027 PDCD11Q14690 1871 aaKnown RBP13.18□□□□□ -0.3
RACK1-229ENST00000513027 KPNA7A9QM74 516 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 ARVCFO00192 962 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 DNM1LO00429 736 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
RACK1-229ENST00000513027 EOMESO95936 686 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 THP07101 528 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 CD19P15391 556 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 BFSP2Q13515 415 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 DSC3Q14574 896 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
RACK1-229ENST00000513027 ACAP1Q15027 740 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 MAP9Q49MG5 647 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 LIMS2Q7Z4I7 341 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 CRYBG2Q8N1P7 616 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 TOP6BLQ8N6T0 577 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 WHAMMQ8TF30 809 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 FNIP1Q8TF40 1166 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 STK32AQ8WU08 396 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 CPA5Q8WXQ8 436 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.17□□□□□ -0.3
RACK1-229ENST00000513027 DDX27Q96GQ7 796 aaKnown RBP13.17□□□□□ -0.3
RACK1-229ENST00000513027 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 CAPZA3Q96KX2 299 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 UROC1Q96N76 676 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 RUNDC3BQ96NL0 473 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
RACK1-229ENST00000513027 NCAPGQ9BPX3 1015 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 STARD7Q9NQZ5 370 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 POLIQ9UNA4 740 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.17□□□□□ -0.3
RACK1-229ENST00000513027 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
RACK1-229ENST00000513027 GOLGA6L10A0A0M3HER8 536 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 ZNF185O15231 689 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 INPPL1O15357 1258 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 NCK2O43639 380 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 SPOPO43791 374 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 CEP104O60308 925 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 HUS1O60921 280 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 RRM1P23921 792 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 AKAP5P24588 427 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 CTNNA1P35221 906 aaKnown RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 CETN2P41208 172 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 GABRB2P47870 512 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 NDST1P52848 882 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 RWDD2BP57060 319 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 PIGHQ14442 188 aaPredicted RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 MESDQ14696 234 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 ARHGAP17Q68EM7 881 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 TMEM86AQ8N2M4 240 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 EIF1ADQ8N9N8 165 aaKnown RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 FEZF2Q8TBJ5 459 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 CD101Q93033 1021 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 HEXIM2Q96MH2 286 aaKnown RBP13.16□□□□□ -0.3
RACK1-229ENST00000513027 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.16□□□□□ -0.3
RACK1-229ENST00000513027 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms