RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TGFB1I1O43294 461 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 TOP3BO95985 862 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 POMCP01189 267 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 RPL17P18621 184 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 TMOD1P28289 359 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 GLUD2P49448 558 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 CASP5P51878 434 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 PPP2R5DQ14738 602 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 PLA2G4FQ68DD2 849 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 SMYD5Q6GMV2 418 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 HS2ST1Q7LGA3 356 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 TRIM59Q8IWR1 403 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 DRC7Q8IY82 874 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 FAM160A2Q8N612 972 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 GLIS3Q8NEA6 775 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 URGCPQ8TCY9 931 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 FGF13Q92913 245 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 TUBGCP2Q9BSJ2 902 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 EDEM3Q9BZQ6 932 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 ARRDC1-AS1Q9H2J1 176 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 PLEKHA4Q9H4M7 779 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 XPNPEP1Q9NQW7 623 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 POLIQ9UNA4 740 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 SSX2IPQ9Y2D8 614 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 MRPS17Q9Y2R5 130 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 DAAM1Q9Y4D1 1078 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 GTPBP10A4D1E9 387 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 SHISA7A6NL88 538 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 F8W810 466 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 GIPC1O14908 333 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 KIAA0391O15091 583 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 MAGEB2O15479 319 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 NRDCO43847 1150 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 USO1O60763 962 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 GCNT3O95395 438 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 PIGRP01833 764 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 ARL2P36404 184 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 OR1G1P47890 313 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 LIMK1P53667 647 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 SMTNP53814 917 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 SATB1Q01826 763 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 POU5F1BQ06416 359 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 DMP1Q13316 513 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 STPG1Q5TH74 334 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 CEP68Q76N32 757 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 TMC6Q7Z403 805 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 MAP4K3Q8IVH8 894 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 LINC01465Q8N7H1 131 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 TMEM161BQ8NDZ6 487 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 ITFG1Q8TB96 612 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 HDAC7Q8WUI4 952 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 PANX2Q96RD6 677 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 NUP58Q9BVL2 599 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 CHRDQ9H2X0 955 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 SMOC1Q9H4F8 434 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 LMAN1LQ9HAT1 526 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 RXFP1Q9HBX9 757 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 MARCH5Q9NX47 278 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 EXOC7Q9UPT5 735 aa11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 PIN4Q9Y237 131 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDLIM5-217ENST00000512274 A0A1W2PQJ5 194 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 PMM2O15305 246 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 CCL16O15467 120 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 ZMYND10O75800 440 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 SKIP12755 728 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 NAMPTP43490 491 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 CCR3P51677 355 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 NPEPPSP55786 919 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 ADAM9Q13443 819 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 EMC2Q15006 297 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 VWA3BQ502W6 1294 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 SPC24Q8NBT2 197 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 CACTINQ8WUQ7 758 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 ING5Q8WYH8 240 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 ACCSQ96QU6 501 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 TMEM175Q9BSA9 504 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 NAA15Q9BXJ9 866 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 TMEM121BQ9BXQ6 578 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 ADAM33Q9BZ11 813 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 TTYH3Q9C0H2 523 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 MYH11P35749 1972 aa11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 FASNP49327 2511 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms