RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 PCDHB1Q9Y5F3 818 aa4.04□□□□□ -1.76
CHD1-207ENST00000511628 NR2E3Q9Y5X4 410 aa4.04□□□□□ -1.76
CHD1-207ENST00000511628 PRAMEF33A0A0G2JMD5 474 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 CCDC195A0A1B0GUA6 201 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 CCDC78A2IDD5 438 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 LRRC14BA6NHZ5 514 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 MASP2O00187 686 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 YY2O15391 372 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 PRAMEF10O60809 474 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SLC43A1O75387 559 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 TUSC2O75896 110 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 UBXN7O94888 489 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 MYL1P05976 194 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SBK3P0C264 359 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 TRIM27P14373 513 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 KCNA2P16389 499 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 PSMC1P62191 440 aaKnown RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 SLFN5Q08AF3 891 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 UBE4AQ14139 1066 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SF3B3Q15393 1217 aaKnown RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 CD300EQ496F6 205 aaPredicted RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 KHDC1Q4VXA5 237 aaKnown RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 PRR16Q569H4 304 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SP5Q6BEB4 398 aaPredicted RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 SWSAP1Q6NVH7 229 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 FBXO42Q6P3S6 717 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 CHST15Q7LFX5 561 aaPredicted RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 ARHGEF25Q86VW2 580 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 DCBLD1Q8N8Z6 715 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 B3GALNT2Q8NCR0 500 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 C3orf20Q8ND61 904 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 NSUN7Q8NE18 718 aaKnown RBP4.03□□□□□ -1.76
CHD1-207ENST00000511628 IL17RDQ8NFM7 739 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SSH3Q8TE77 659 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SNX19Q92543 992 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 PMM1Q92871 262 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 SARGQ9BW04 601 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 DDX21Q9NR30 783 aaKnown RBP eCLIP4.03□□□□□ -1.76
CHD1-207ENST00000511628 CFAP97Q9P2B7 532 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 POLHQ9Y253 713 aa4.03□□□□□ -1.76
CHD1-207ENST00000511628 POLRMTO00411 1230 aaKnown RBP4.02□□□□□ -1.77
CHD1-207ENST00000511628 TPP1O14773 563 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 ARIH2O95376 493 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 ANXA1P04083 346 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 SLC6A4P31645 630 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 MAP2K6P52564 334 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 TLE1Q04724 770 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 ZNF169Q14929 603 aaPredicted RBP4.02□□□□□ -1.77
CHD1-207ENST00000511628 KAZNQ674X7 775 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 IL31Q6EBC2 164 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 DENND1CQ8IV53 801 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 BOLLQ8N9W6 283 aaKnown RBP4.02□□□□□ -1.77
CHD1-207ENST00000511628 FAM156AQ8NDB6 213 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 SIMC1Q8NDZ2 872 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 PLBD2Q8NHP8 589 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 NSUN6Q8TEA1 469 aaKnown RBP4.02□□□□□ -1.77
CHD1-207ENST00000511628 C1GALT1C1Q96EU7 318 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 KLHL32Q96NJ5 620 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 CGRRF1Q99675 332 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 CHMP4AQ9BY43 222 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 B3GNT5Q9BYG0 378 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 SIK2Q9H0K1 926 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 SYNPO2LQ9H987 977 aa4.02□□□□□ -1.77
CHD1-207ENST00000511628 FEZ2Q9UHY8 353 aaPredicted RBP4.02□□□□□ -1.77
CHD1-207ENST00000511628 A0A1W2PS29 197 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 CCDC151A5D8V7 595 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 ZNF785A8K8V0 405 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 F5H697 171 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 H3BML4 177 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 C1RP00736 705 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 FTLP02792 175 aaPredicted RBP4.01□□□□□ -1.77
CHD1-207ENST00000511628 GNAI2P04899 355 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 GJB1P08034 283 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 RHCEP18577 417 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 MALP21145 153 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 HTR1BP28222 390 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 FOLR3P41439 243 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 ANXA11P50995 505 aaKnown RBP4.01□□□□□ -1.77
CHD1-207ENST00000511628 NEK3P51956 506 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 RHDQ02161 417 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 SCAPQ12770 1279 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 HLTFQ14527 1009 aaKnown RBP eCLIP4.01□□□□□ -1.77
CHD1-207ENST00000511628 FAM153CQ494X1 144 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 FLYWCH1Q4VC44 716 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 COBLL1Q53SF7 1204 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 CCDC93Q567U6 631 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 PPP4R4Q6NUP7 873 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 TAPT1Q6NXT6 567 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 SYCE2Q6PIF2 218 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 SLC30A10Q6XR72 485 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 GRASPQ7Z6J2 395 aaPredicted RBP4.01□□□□□ -1.77
CHD1-207ENST00000511628 CCAR1Q8IX12 1150 aaKnown RBP4.01□□□□□ -1.77
CHD1-207ENST00000511628 KIAA0319LQ8IZA0 1049 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 CFAP52Q8N1V2 620 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 LNX2Q8N448 690 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 CAMKK1Q8N5S9 505 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 PDPRQ8NCN5 879 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 TMIEQ8NEW7 156 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 PJA1Q8NG27 643 aa4.01□□□□□ -1.77
CHD1-207ENST00000511628 SLC30A5Q8TAD4 765 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms