RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ANLNQ9NQW6 1124 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 ATP11BQ9Y2G3 1177 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 SIGLEC1Q9BZZ2 1709 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 NINLQ9Y2I6 1382 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 ARHGEF40Q8TER5 1519 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 CDHR4A6H8M9 788 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 AP1G1O43747 822 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 NARSO43776 548 aaKnown RBP8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 PPFIA4O75335 1185 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 PRSS23O95084 383 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 FLYWCH1Q4VC44 716 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF365Q70YC5 407 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 GRAMD1CQ8IYS0 662 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 SLC35G2Q8TBE7 412 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF483Q8TF39 744 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 NUP133Q8WUM0 1156 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 MYEOVQ96EZ4 313 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 PHACTR3Q96KR7 559 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 TAAR9Q96RI9 348 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 POLR3GLQ9BT43 218 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 PACSIN1Q9BY11 444 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF341Q9BYN7 854 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 AKIP1Q9NQ31 210 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 KNSTRNQ9Y448 316 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 FPGT-TNNI3KV9GXZ4 949 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 MYOM1P52179 1685 aa8.61□□□□□ -1.03
TRAPPC11-206ENST00000509857 CENPJQ9HC77 1338 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 ERVK-7P63135 1459 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 H3BML4 177 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 CKBP12277 381 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 C6P13671 934 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 PTGS2P35354 604 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 HEATR3Q7Z4Q2 680 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 FAM90A1Q86YD7 464 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 MAGEB6Q8N7X4 407 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 RNPEPQ9H4A4 650 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 WDCPQ9H6R7 721 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 PANK3Q9H999 370 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 DKK2Q9UBU2 259 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 PCDHA3Q9Y5H8 950 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 TMEM131LA2VDJ0 1609 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 USP32Q8NFA0 1604 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 SPATA31D1Q6ZQQ2 1576 aa8.6□□□□□ -1.03
TRAPPC11-206ENST00000509857 RNF123Q5XPI4 1314 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 TMEM200CA6NKL6 621 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 NPIPB8E9PQR5 432 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 PRPF3O43395 683 aaKnown RBP8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 NCR1O76036 304 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF202O95125 648 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 ALDH2P05091 517 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 CFIP05156 583 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 PRDX5P30044 214 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 BMPR1AP36894 532 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 TSHZ3Q63HK5 1081 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 HAS1Q92839 578 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 RUNDC1Q96C34 613 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 CLIP3Q96DZ5 547 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 LMBRD1Q9NUN5 540 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 RLIMQ9NVW2 624 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 NUDCQ9Y266 331 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 HS3ST4Q9Y661 456 aa8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 BLMP54132 1417 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC11-206ENST00000509857 A0A1B0GTW7 788 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 ANXA1P04083 346 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 TYRP14679 529 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 LAG3P18627 525 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 NOMO3P69849 1222 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 NKX6-1P78426 367 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 ZXDAP98168 799 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 OCA2Q04671 838 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 NOMO2Q5JPE7 1267 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 ARMC6Q6NXE6 501 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 DENND1CQ8IV53 801 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 TBC1D15Q8TC07 691 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 CDK5RAP3Q96JB5 506 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 LRGUKQ96M69 825 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 NRDE2Q9H7Z3 1164 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 SLC2A4RGQ9NR83 387 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 GNL3LQ9NVN8 582 aaKnown RBP8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 STXBP5LQ9Y2K9 1186 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 KIF13AQ9H1H9 1805 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 NSD2O96028 1365 aa8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
TRAPPC11-206ENST00000509857 ELANEP08246 267 aa8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 CCDC93Q567U6 631 aa8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 PDSS2Q86YH6 399 aa8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 CGRRF1Q99675 332 aa8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 NOB1Q9ULX3 412 aaKnown RBP8.57□□□□□ -1.04
TRAPPC11-206ENST00000509857 NR2E3Q9Y5X4 410 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms