RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 GJC2Q5T442 439 aaPredicted RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 JADE1Q6IE81 842 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 DCUN1D2Q6PH85 259 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 CCDC105Q8IYK2 499 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ARFGAP2Q8N6H7 521 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 LRRC52Q8N7C0 313 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 TSEN2Q8NCE0 465 aaKnown RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 NPLOC4Q8TAT6 608 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 CXorf38Q8TB03 319 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 USP6NLQ92738 828 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 TMEM176AQ96HP8 235 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 HPDLQ96IR7 371 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ZIM3Q96PE6 472 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 APBA2Q99767 749 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 NCAPGQ9BPX3 1015 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 AP5M1Q9H0R1 490 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ADAMTS10Q9H324 1103 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 SIX4Q9UIU6 781 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 MCM3APO60318 1980 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ZSCAN5CA6NGD5 496 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 SIGLEC16A6NMB1 481 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 HAS3O00219 553 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 RPS6KA5O75582 802 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 ITGB3P05106 788 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 GJB1P08034 283 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 KRT7P08729 469 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 FAM163BP0C2L3 166 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 FAM153BP0C7A2 387 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 ZNF865P0CJ78 1059 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 SMIM10L2AP0DMW4 78 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 SMIM10L2BP0DMW5 78 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 RARAP10276 462 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 DARSP14868 501 aaKnown RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 GUCY2FP51841 1108 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 OSTNP61366 133 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 MRPS25P82663 173 aaKnown RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 PTPN11Q06124 597 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 SREBF2Q12772 1141 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 CALCOCO2Q13137 446 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 MFSD10Q14728 455 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 SIX1Q15475 284 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 TAF1CQ15572 869 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 CCNG2Q16589 344 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 FAM153CQ494X1 144 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 SGO2Q562F6 1265 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 DRICH1Q6PGQ1 229 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 C17orf99Q6UX52 265 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 ILDR2Q71H61 639 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 TMC3Q7Z5M5 1100 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 TLK2Q86UE8 772 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 RASAL3Q86YV0 1011 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 PASD1Q8IV76 773 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 CEP120Q8N960 986 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 BEST2Q8NFU1 509 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 ATL2Q8NHH9 583 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 BTBD6Q96KE9 485 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 GDAP1L1Q96MZ0 367 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 FOXP3Q9BZS1 431 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 ERVK-5Q9HDB9 667 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 ZDHHC18Q9NUE0 388 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 DPP3Q9NY33 737 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 WHRNQ9P202 907 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 NXF1Q9UBU9 619 aaKnown RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 FAM153AQ9UHL3 310 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
HTT-205ENST00000509043 NR2E1Q9Y466 385 aa9.79□□□□□ -0.84
HTT-205ENST00000509043 DYNC1LI2O43237 492 aaPredicted RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 GPR32O75388 356 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 TJP3O95049 919 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 CD4P01730 458 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 IGHA2P01877 340 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 NUDT17P0C025 328 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 MYZAPP0CAP1 466 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 CYP2C9P11712 490 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 CD19P15391 556 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 DESP17661 470 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 ITIH2P19823 946 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 HSD17B3P37058 310 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 PNPLA4P41247 253 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 GABRB2P47870 512 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 PSEN2P49810 448 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 ZNF157P51786 506 aaPredicted RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 RAD23BP54727 409 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 ADAM17P78536 824 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 SKOR1P84550 965 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 MKRN3Q13064 507 aaKnown RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 KLF1Q13351 362 aaPredicted RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 PTK6Q13882 451 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 HADHQ16836 314 aaKnown RBP9.78□□□□□ -0.84
HTT-205ENST00000509043 ODF2Q5BJF6 829 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 AGBL2Q5U5Z8 902 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 CST9Q5W186 159 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 RGMBQ6NW40 437 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 TAF2Q6P1X5 1199 aa9.78□□□□□ -0.84
HTT-205ENST00000509043 LEKR1Q6ZMV7 388 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms