RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 IGSF11Q5DX21 431 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GDF6Q6KF10 455 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PPP1R42Q7Z4L9 355 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 RAB3IL1Q8TBN0 382 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 AGR3Q8TD06 166 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SMC6Q96SB8 1091 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MRPL4Q9BYD3 311 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ACE2Q9BYF1 805 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GCOM2Q9BZD3 368 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EPN3Q9H201 632 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EPS8L2Q9H6S3 715 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GMIPQ9P107 970 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NCDNQ9UBB6 729 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 REV1Q9UBZ9 1251 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF212Q9UDV6 495 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ANKRD34BA5PLL1 514 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 AKR1B15C9JRZ8 316 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ERVH48-1M5A8F1 160 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PEX11AO75192 247 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 INHAP05111 366 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 UGT2B4P06133 528 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 HSPA8P11142 646 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CYP19A1P11511 503 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GSPT1P15170 499 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 LSP1P33241 339 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TXKP42681 527 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MTHFRP42898 656 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 LIG4P49917 911 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TUBA3CQ13748 450 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 BTG3Q14201 252 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 UGT8Q16880 541 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PDE12Q6L8Q7 609 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TMEM154Q6P9G4 183 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PXKQ7Z7A4 578 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 FBXO30Q8TB52 745 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EDC3Q96F86 508 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NT5C1BQ96P26 610 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PKP4Q99569 1192 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PHF20Q9BVI0 1012 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TPPP3Q9BW30 176 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 LGR4Q9BXB1 951 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MTMR12Q9C0I1 747 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ANTXR1Q9H6X2 564 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 LMBRD1Q9NUN5 540 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TRPC4Q9UBN4 977 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SPASTQ9UBP0 616 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 STX8Q9UNK0 236 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 hCG_1809904A0A1W2PP81 198 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 A0A1W2PPE2 198 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 A0A1W2PR64 198 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NT5C1B-RDH14C9J2C7 533 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 H3BQV1 296 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ADAMTS3O15072 1205 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PRAMEF4O60810 478 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EPHX1P07099 455 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SLFN14P0C7P3 912 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MTHFD2P13995 350 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 POU1F1P28069 291 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 THPOP40225 353 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SKIV2L2P42285 1042 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TSC22D1Q15714 1073 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SPRED3Q2MJR0 410 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MMEL1Q495T6 779 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 LDLRAP1Q5SW96 308 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CACHD1Q5VU97 1274 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 C1orf94Q6P1W5 598 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 IYDQ6PHW0 289 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EIF3MQ7L2H7 374 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SH3BP5LQ7L8J4 393 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TAF8Q7Z7C8 310 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ARMC8Q8IUR7 673 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SIX6OS1Q8N1H7 587 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 BRIX1Q8TDN6 353 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NSMCE1Q8WV22 266 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CHTF18Q8WVB6 975 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 DDX1Q92499 740 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 DIO2Q92813 273 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TOR4AQ9NXH8 423 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MCM9Q9NXL9 1143 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 DTNAQ9Y4J8 743 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 IGKV5-2P06315 115 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NR1D1P20393 614 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CARSP49589 748 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 FOXO4P98177 505 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SETMARQ53H47 684 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF697Q5TEC3 545 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 HFE2Q6ZVN8 426 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 UTS2BQ765I0 119 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TDRD7Q8NHU6 1098 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PIGBQ92521 554 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EXT2Q93063 718 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TMEM169Q96HH4 297 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PGBD1Q96JS3 809 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TM9SF2Q99805 663 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 WDR12Q9GZL7 423 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 C1orf21Q9H246 121 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 BICC1Q9H694 974 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SNTG1Q9NSN8 517 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 DKK3Q9UBP4 350 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GPR55Q9Y2T6 319 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms