RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 URODP06132 367 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 OR4Q2P0C623 313 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 ODC1P11926 461 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 IGFBP4P22692 258 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 MYO1EQ12965 1108 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 PSMD5Q16401 504 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 PTPROQ16827 1216 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 DUSP6Q16828 381 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 PDE12Q6L8Q7 609 aaKnown RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 PHLDB3Q6NSJ2 640 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 LILRA6Q6PI73 481 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 RBM23Q86U06 439 aaKnown RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 GLYCTKQ8IVS8 523 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 ARHGEF19Q8IW93 802 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 FAM114A1Q8IWE2 563 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 MICAL1Q8TDZ2 1067 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 TAF4BQ92750 862 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 KREMEN1Q96MU8 473 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 TWNKQ96RR1 684 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 LPIN3Q9BQK8 851 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 NSUN3Q9H649 340 aaKnown RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 MRPL17Q9NRX2 175 aaKnown RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 TMLHEQ9NVH6 421 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 HMGXB4Q9UGU5 601 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 BACE2Q9Y5Z0 518 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 WDR27A2RRH5 827 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 GTPBP10A4D1E9 387 aaKnown RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 SMTNL1A8MU46 457 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 TEX33O43247 280 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 AP5Z1O43299 807 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 ATP2C2O75185 946 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 TACC1O75410 805 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 CAVIN2O95810 425 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 WEE2P0C1S8 567 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 FOSL2P15408 326 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 EPCAMP16422 314 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 PAX3P23760 479 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 ACAT1P24752 427 aaKnown RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 PON1P27169 355 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 OR1D2P34982 312 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 LTBRP36941 435 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 NRIP1P48552 1158 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 KLK7P49862 253 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 CDR1P51861 262 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 ROR1Q01973 937 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 YWHAHQ04917 246 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 DLX2Q07687 328 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 LRMPQ12912 555 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 CTC1Q2NKJ3 1217 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 ZNF667Q5HYK9 610 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 SLC8B1Q6J4K2 584 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 KIAA1841Q6NSI8 718 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 GJB7Q6PEY0 223 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 SCARA5Q6ZMJ2 495 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 ADGRF2Q8IZF7 708 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 RNF214Q8ND24 703 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 NIF3L1Q9GZT8 377 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 INTS2Q9H0H0 1204 aaKnown RBP11.08□□□□□ -0.64
PTPN20-220ENST00000508715 RBSNQ9H1K0 784 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 CRISPLD1Q9H336 500 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 CDY1Q9Y6F8 540 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 OBSL1O75147 1896 aa11.08□□□□□ -0.64
PTPN20-220ENST00000508715 EPHB6O15197 1021 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 TGM5O43548 720 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 HUS1O60921 280 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 N4BP1O75113 896 aaKnown RBP11.07□□□□□ -0.64
PTPN20-220ENST00000508715 NOL4O94818 638 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 ABLIM3O94929 683 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 SEC24AO95486 1093 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 SPATA31D3P0C874 917 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 ACO1P21399 889 aaKnown RBP11.07□□□□□ -0.64
PTPN20-220ENST00000508715 CLCN4P51793 760 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 ADAM15Q13444 863 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 RAB33AQ14088 237 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-220ENST00000508715 CTXN3Q4LDR2 81 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 ZNF280DQ6N043 979 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 TRIM65Q6PJ69 517 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 SPATA31D4Q6ZUB0 917 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 PALB2Q86YC2 1186 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 TMEM86AQ8N2M4 240 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 APPL2Q8NEU8 664 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 MMS19Q96T76 1030 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 ZCWPW1Q9H0M4 648 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 DPEP3Q9H4B8 488 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 TLE6Q9H808 572 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
PTPN20-220ENST00000508715 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms