RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PPP1R32Q7Z5V6 425 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 FAM167AQ96KS9 214 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 LRFN3Q9BTN0 628 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 CNPPD1Q9BV87 410 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 KRTAP17-1Q9BYP8 105 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 RHOBTB2Q9BYZ6 727 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 TINAGL1Q9GZM7 467 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 SLC12A5Q9H2X9 1139 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 SMOC2Q9H3U7 446 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 KMT5AQ9NQR1 393 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 SPATA31A3Q5VYP0 1347 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 C1QL1O75973 258 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 KIF20AO95235 890 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 AHSGP02765 367 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 TOB1P50616 345 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 MAPK10P53779 464 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 IGBP1P78318 339 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 NKX6-1P78426 367 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PIN1Q13526 163 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PTPRRQ15256 657 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 NBPF8Q3BBV2 869 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 ATAT1Q5SQI0 421 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 TAF2Q6P1X5 1199 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PEG10Q86TG7 708 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 FAM9AQ8IZU1 332 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 SH2D3CQ8N5H7 860 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 BOLLQ8N9W6 283 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PSD4Q8NDX1 1056 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 TOR1AIP2Q8NFQ8 470 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 TFAP2BQ92481 460 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PCSK5Q92824 1860 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 FBXL20Q96IG2 436 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 KIAA1586Q9HCI6 787 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PNPOQ9NVS9 261 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 PTGFRNQ9P2B2 879 aa6.8□□□□□ -1.32
TOPBP1-206ENST00000508524 SPATA31A6Q5VVP1 1343 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 WDR27A2RRH5 827 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 ALDH2P05091 517 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 PLS1Q14651 629 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 TXNRD1Q16881 649 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 KAZNQ674X7 775 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 PGBD1Q96JS3 809 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 RTFDC1Q9BY42 306 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 SEMA4GQ9NTN9 838 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 PCDHA1Q9Y5I3 950 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 NR2E3Q9Y5X4 410 aa6.79□□□□□ -1.32
TOPBP1-206ENST00000508524 A0A0B4J269 797 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 VWC2LB2RUY7 222 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 ADM5C9JUS6 153 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 ELFN1P0C7U0 828 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 CHRM3P20309 590 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 NDUFV1P49821 464 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 ELLP55199 621 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 TUBB3Q13509 450 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 ZNF267Q14586 743 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 USP37Q86T82 979 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 SLC35A4Q96G79 324 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 MAP3K14Q99558 947 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 SIK2Q9H0K1 926 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 KLK15Q9H2R5 256 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 RSAD1Q9HA92 442 aa6.78□□□□□ -1.32
TOPBP1-206ENST00000508524 H3BUI4 141 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 M0QYG6 137 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 AKAP10O43572 662 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 VPS4BO75351 444 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 IGLV2-14P01704 120 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 CHRM2P08172 466 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 GRIA3P42263 894 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 ITIH3Q06033 890 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 EXOSC9Q06265 439 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 EMC10Q5UCC4 262 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 GRAMD1CQ8IYS0 662 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 B3GALNT2Q8NCR0 500 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 CDK5RAP3Q96JB5 506 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 OSBPL9Q96SU4 736 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 HEPHQ9BQS7 1158 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 IL17RBQ9NRM6 502 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 SLC17A6Q9P2U8 582 aa6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.77□□□□□ -1.33
TOPBP1-206ENST00000508524 ADGRA2Q96PE1 1338 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 E2F8A0AVK6 867 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 CCDC151A5D8V7 595 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 F5H697 171 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 OFD1O75665 1012 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 SOAT2O75908 522 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 GNAI2P04899 355 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 RHOP08100 348 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 CT47B1P0C2W7 299 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 RAB27AP51159 221 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 NXPH1P58417 271 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 BOP1Q14137 746 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 IFIT1BQ5T764 474 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 SYCE2Q6PIF2 218 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 FAM109AQ8N4B1 249 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 CELF5Q8N6W0 485 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 PLBD2Q8NHP8 589 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 BRIX1Q8TDN6 353 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms