RNA–Protein interactions for RNA: ENST00000507807.3

CLPTM1L-209, Transcript of CLPTM1 like, humanhuman

TSL 1 (best) BASIC

Gene CLPTM1L, Length 1,740 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-209ENST00000507807 ORC1Q13415 861 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 MAP9Q49MG5 647 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 CCSAPQ6IQ19 270 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 GDF6Q6KF10 455 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 ZDHHC14Q8IZN3 488 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 WNT8BQ93098 351 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 C18orf25Q96B23 403 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 TMEM176AQ96HP8 235 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 DDX47Q9H0S4 455 aaKnown RBP17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 FAM124BQ9H5Z6 455 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 MRPL47Q9HD33 250 aaKnown RBP17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 CYTH4Q9UIA0 394 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 SCINQ9Y6U3 715 aa17.48■□□□□ 0.39
CLPTM1L-209ENST00000507807 GJB6O95452 261 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 CALB1P05937 261 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 AKAP5P24588 427 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 CCND3P30281 292 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 SP3Q02447 781 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 PTPN11Q06124 597 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 CASP8Q14790 479 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 CLUL1Q15846 466 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 FAM228AQ86W67 206 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 KLHDC9Q8NEP7 349 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 FEZF2Q8TBJ5 459 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 CAPNS2Q96L46 248 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 PLEKHA4Q9H4M7 779 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 PARVAQ9NVD7 372 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 TMEM191CA6NGB0 347 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 MED7O43513 233 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 CD19P15391 556 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 RWDD2BP57060 319 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 GUCY2DQ02846 1103 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 GLRA4Q5JXX5 417 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 PPP1R15BQ5SWA1 713 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 SERINC5Q86VE9 423 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 SMG8Q8ND04 991 aaKnown RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 TRIM6Q9C030 488 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 SLITRK6Q9H5Y7 841 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 SPC25Q9HBM1 224 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 EPB41L5Q9HCM4 733 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 ERVK-5Q9HDB9 667 aa17.47■□□□□ 0.39
CLPTM1L-209ENST00000507807 TRIP11Q15643 1979 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 SMIM28A0A1B0GU29 152 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 TOMM70O94826 608 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 KCNE1P15382 129 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 NDST1P52848 882 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 RPL7AP62424 266 aaKnown RBP17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 CBX1P83916 185 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 MYO1EQ12965 1108 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 TRADDQ15628 312 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 PTPN20Q4JDL3 420 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 SESTD1Q86VW0 696 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 IFT20Q8IY31 132 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 LRRC52Q8N7C0 313 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 ARRDC4Q8NCT1 418 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 BEST2Q8NFU1 509 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 CASKIN2Q8WXE0 1202 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 DDX27Q96GQ7 796 aaKnown RBP17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 CFHR5Q9BXR6 569 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 XPNPEP3Q9NQH7 507 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 RNF19AQ9NV58 838 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 IPPQ9Y573 584 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 CDY2AQ9Y6F7 541 aa17.46■□□□□ 0.39
CLPTM1L-209ENST00000507807 CASP8AP2Q9UKL3 1982 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 ESYT3A0FGR9 886 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 O00370 1275 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 TLR3O15455 904 aaKnown RBP17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 CHRNA1P02708 482 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 ELNP15502 786 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 MAN1A1P33908 653 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 CARSP49589 748 aaKnown RBP17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 CNGA2Q16280 664 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 ADAT2Q7Z6V5 191 aaKnown RBP17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 ERICH1Q86X53 443 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 TTC39CQ8N584 583 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 TSPAN18Q96SJ8 248 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 APOL6Q9BWW8 343 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 AMACRQ9UHK6 382 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 UBQLN1Q9UMX0 589 aaKnown RBP17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 CEP83Q9Y592 693 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 TRPV2Q9Y5S1 764 aa17.45■□□□□ 0.38
CLPTM1L-209ENST00000507807 TCRBV7S2A1N4TA0A589 114 aa17.44■□□□□ 0.38
CLPTM1L-209ENST00000507807 PIRO00625 290 aa17.44■□□□□ 0.38
CLPTM1L-209ENST00000507807 MICAL2O94851 1124 aa17.44■□□□□ 0.38
CLPTM1L-209ENST00000507807 ASGR1P07306 291 aa17.44■□□□□ 0.38
CLPTM1L-209ENST00000507807 VDRP11473 427 aa17.44■□□□□ 0.38
CLPTM1L-209ENST00000507807 HSPA6P17066 643 aa17.44■□□□□ 0.38
CLPTM1L-209ENST00000507807 CYP3A5P20815 502 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms