RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SPATA20Q8TB22 786 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 KCNE4Q8WWG9 221 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 EXTL1Q92935 676 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 CD101Q93033 1021 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 MIB2Q96AX9 1013 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF578Q96N58 590 aaPredicted RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TBC1D32Q96NH3 1257 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PNMA5Q96PV4 448 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 MXRA8Q9BRK3 442 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 DPH1Q9BZG8 443 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 SMG9Q9H0W8 520 aaKnown RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 CRISPLD1Q9H336 500 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 KDM4CQ9H3R0 1056 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 NXF3Q9H4D5 531 aaKnown RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 SLITRK6Q9H5Y7 841 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 UBN1Q9NPG3 1134 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 GPRC5CQ9NQ84 441 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 ASAH2Q9NR71 780 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 HCN2Q9UL51 889 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 CCL26Q9Y258 94 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PCDHB1Q9Y5F3 818 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PKDREJQ9NTG1 2253 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 STAB1Q9NY15 2570 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 DIDO1Q9BTC0 2240 aaKnown RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 JMJD1CQ15652 2540 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 A0A1B0GTW7 788 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 TMEM150BA6NC51 233 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 TMEM189-UBE2V1I3L0A0 370 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 DDX39AO00148 427 aaKnown RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 MEIS1O00470 390 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CITO14578 2027 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 PRRG1O14668 218 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 PAPSS1O43252 624 aaPredicted RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 ANP32CO43423 234 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 PCDHGA12O60330 932 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SEMA7AO75326 666 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 RFPL3O75679 317 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CER1O95813 267 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 FGAP02671 866 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 AKAP5P24588 427 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 TMOD1P28289 359 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CASRP41180 1078 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 MATKP42679 507 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 GRK6P43250 576 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 KIR2DL1P43626 348 aaPredicted RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 UQCRFS1P47985 274 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 USP11P51784 963 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CDR1P51861 262 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SEC13P55735 322 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 OXCT1P55809 520 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 ERVPABLB-1P60509 514 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 INSM1Q01101 510 aaPredicted RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 PSMD2Q13200 908 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 MRPL58Q14197 206 aaKnown RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 PTPAQ15257 358 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 UGCGQ16739 394 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 KCNT1Q5JUK3 1230 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 EMC10Q5UCC4 262 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SLC36A4Q6YBV0 504 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 ALLCQ8N6M5 410 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 TXNDC5Q8NBS9 432 aaKnown RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 BEST2Q8NFU1 509 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 HMGB4Q8WW32 186 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 USP13Q92995 863 aaPredicted RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 GPATCH3Q96I76 525 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 ZFRQ96KR1 1074 aaKnown RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF512Q96ME7 567 aaPredicted RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 FAM20AQ96MK3 541 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SCLT1Q96NL6 688 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SDF4Q9BRK5 362 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SLC46A2Q9BY10 475 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SLC25A18Q9H1K4 315 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 FAM124BQ9H5Z6 455 aaPredicted RBP3.74□□□□□ -1.81
TCOF1-208ENST00000506063 IL21Q9HBE4 155 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CYP4F11Q9HBI6 524 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 ZDHHC4Q9NPG8 344 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 TOMM22Q9NS69 142 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CALCOCO1Q9P1Z2 691 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 SUSD2Q9UGT4 822 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 TPCN1Q9ULQ1 816 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 CEP131Q9UPN4 1083 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 GIT1Q9Y2X7 761 aa3.74□□□□□ -1.81
TCOF1-208ENST00000506063 IGLV3-22A0A075B6J6 115 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 A0A1B0GVT2 93 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TCRBV21S2A2A0A5A6 115 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 VPS37CA5D8V6 355 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 I3L4J1 428 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ENC1O14682 589 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TSPAN1O60635 241 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 NR1I2O75469 434 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ALDH1A2O94788 518 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 KLF8O95600 359 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 OATP04181 439 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 MPOP05164 745 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 C1SP09871 688 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CT47B1P0C2W7 299 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 RLBP1P12271 317 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 GLDCP23378 1020 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 AFMP43652 599 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 HAND2P61296 217 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms