RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZNF844Q08AG5 666 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 TIGD2Q4W5G0 525 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 LRRC55Q6ZSA7 311 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 DGKHQ86XP1 1220 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 KIAA0319LQ8IZA0 1049 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 TMEM132CQ8N3T6 1108 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 PDPRQ8NCN5 879 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 HAS1Q92839 578 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 MED15Q96RN5 788 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 RSAD1Q9HA92 442 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 SLC2A4RGQ9NR83 387 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 GEMIN8Q9NWZ8 242 aaKnown RBP7.09□□□□□ -1.27
NIPBL-205ENST00000505998 FZD1Q9UP38 647 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 NOX1Q9Y5S8 564 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 PLCH2O75038 1416 aa7.09□□□□□ -1.28
NIPBL-205ENST00000505998 FRMPD1Q5SYB0 1578 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 ZMYM4Q5VZL5 1548 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 A0A1W2PPL8 197 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 CCDC78A2IDD5 438 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 A6NNZ2 444 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 ELANEP08246 267 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 HDCP19113 662 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 ZNF135P52742 658 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-205ENST00000505998 PIGFQ07326 219 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 BEAN1Q3B7T3 259 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 EMC10Q5UCC4 262 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-205ENST00000505998 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 CCDC149Q6ZUS6 474 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 MAEAQ7L5Y9 396 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 CPEB3Q8NE35 698 aaKnown RBP7.08□□□□□ -1.28
NIPBL-205ENST00000505998 RNF31Q96EP0 1072 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 MYEOVQ96EZ4 313 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 NT5C1BQ96P26 610 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 SIK2Q9H0K1 926 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 GPR35Q9HC97 309 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 HSFX1Q9UBD0 423 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 KCNE5Q9UJ90 142 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 MYOM3Q5VTT5 1437 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 MTUS2Q5JR59 1369 aa7.08□□□□□ -1.28
NIPBL-205ENST00000505998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.08□□□□□ -1.28
NIPBL-205ENST00000505998 TEX14Q8IWB6 1497 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 CHEK2O96017 543 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 TNFRSF1AP19438 455 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 DDX6P26196 483 aaKnown RBP eCLIP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 BMPR1AP36894 532 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 RESTQ13127 1097 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 CNN3Q15417 329 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 B3GNTL1Q67FW5 361 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 ARMC6Q6NXE6 501 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 CHST15Q7LFX5 561 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 CELF5Q8N6W0 485 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 PCSK9Q8NBP7 692 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 ZNF483Q8TF39 744 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 DDX17Q92841 729 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 LENG9Q96B70 501 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 ZMAT3Q9HA38 289 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 PIH1D1Q9NWS0 290 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 GPRC5BQ9NZH0 403 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 L1RE1Q9UN81 338 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 RRBP1Q9P2E9 1410 aaKnown RBP7.07□□□□□ -1.28
NIPBL-205ENST00000505998 MAST1Q9Y2H9 1570 aa7.07□□□□□ -1.28
NIPBL-205ENST00000505998 DNMT1P26358 1616 aaKnown RBP7.06□□□□□ -1.28
NIPBL-205ENST00000505998 PTPN23Q9H3S7 1636 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 CFAP69A5D8W1 941 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 TMEM200CA6NKL6 621 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 E9PLN8 166 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 NPIPB8E9PQR5 432 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 TPP1O14773 563 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 PHGDHO43175 533 aaKnown RBP7.06□□□□□ -1.28
NIPBL-205ENST00000505998 ZBED1O96006 694 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 CACNB3P54284 484 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 USP14P54578 494 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 CXADRP78310 365 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 CRB2Q5IJ48 1285 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 FNDC7Q5VTL7 733 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 KCNV1Q6PIU1 500 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 USP37Q86T82 979 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 CFAP52Q8N1V2 620 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 FAM43AQ8N2R8 423 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 FAM156AQ8NDB6 213 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 TIFAQ96CG3 184 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 SMOQ99835 787 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 VKORC1Q9BQB6 163 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 CNPPD1Q9BV87 410 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 ALOXE3Q9BYJ1 711 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 KIAA1107Q9UPP5 1409 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 INO80Q9ULG1 1556 aaPredicted RBP7.06□□□□□ -1.28
NIPBL-205ENST00000505998 TSPOAP1O95153 1857 aa7.06□□□□□ -1.28
NIPBL-205ENST00000505998 PLEKHH2Q8IVE3 1493 aa7.05□□□□□ -1.28
NIPBL-205ENST00000505998 BCORL1Q5H9F3 1711 aa7.05□□□□□ -1.28
NIPBL-205ENST00000505998 FGD6Q6ZV73 1430 aa7.05□□□□□ -1.28
NIPBL-205ENST00000505998 PLEKHD1A6NEE1 506 aa7.05□□□□□ -1.28
NIPBL-205ENST00000505998 MARCH11A6NNE9 402 aa7.05□□□□□ -1.28
NIPBL-205ENST00000505998 POLRMTO00411 1230 aaKnown RBP7.05□□□□□ -1.28
NIPBL-205ENST00000505998 CDKL5O76039 1030 aa7.05□□□□□ -1.28
NIPBL-205ENST00000505998 ZNF202O95125 648 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms