RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 MLLT6P55198 1093 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 TAF12Q16514 161 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 C1orf228Q6PIY5 440 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 DCP1BQ8IZD4 617 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 SYCP3Q8IZU3 236 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 SPPL2BQ8TCT7 592 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 FAM3CQ92520 227 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 MSANTD3Q96H12 275 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 ZNF560Q96MR9 790 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 USP28Q96RU2 1077 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 SEPT5Q99719 369 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 FAM213AQ9BRX8 229 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 IER2Q9BTL4 223 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 LRRC27Q9C0I9 530 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 ATXN3LQ9H3M9 355 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 TMEM206Q9H813 350 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 PANK4Q9NVE7 773 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 PCDHGA2Q9Y5H1 932 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 PIAS3Q9Y6X2 628 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 SHISA7A6NL88 538 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 DPYSL4O14531 572 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 CHADO15335 359 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 STX6O43752 255 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 SOAT2O75908 522 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 GABRR2P28476 465 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 CDC25CP30307 473 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 TFAMQ00059 246 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 FOXK2Q01167 660 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 KCNA1Q09470 495 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 FCHO2Q0JRZ9 810 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 FZD5Q13467 585 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 WSCD1Q658N2 575 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 STXBP4Q6ZWJ1 553 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 BRSK2Q8IWQ3 736 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 EFCAB13Q8IY85 973 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 TTC9BQ8N6N2 239 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 RUBCNQ92622 972 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 HINFPQ9BQA5 517 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 IKZF4Q9H2S9 585 aa13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-214ENST00000505746 CITO14578 2027 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 NOTCH4Q99466 2003 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 TRIP11Q15643 1979 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
PDLIM7-214ENST00000505746 EXTL3O43909 919 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 WEE1P30291 646 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 ID4P47928 161 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
PDLIM7-214ENST00000505746 KPNA1P52294 538 aaPredicted RBP13□□□□□ -0.33
PDLIM7-214ENST00000505746 TSPY1Q01534 308 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 MTAPQ13126 283 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 STK38Q15208 465 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 GPR158Q5T848 1215 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 GAREM2Q75VX8 874 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 SAAL1Q96ER3 474 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 LPIN3Q9BQK8 851 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 FAM126AQ9BYI3 521 aaPredicted RBP13□□□□□ -0.33
PDLIM7-214ENST00000505746 TASP1Q9H6P5 420 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 C8orf33Q9H7E9 229 aaPredicted RBP13□□□□□ -0.33
PDLIM7-214ENST00000505746 LMAN1LQ9HAT1 526 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 ZSCAN32Q9NX65 697 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 OBP2AQ9NY56 170 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 ZMYM5Q9UJ78 669 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 PCDHB5Q9Y5E4 795 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
PDLIM7-214ENST00000505746 A0A087X0B3 334 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 ARNTLO00327 626 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 KIAA0391O15091 583 aaKnown RBP12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 HUS1O60921 280 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 ITGB3P05106 788 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 ATF6P18850 670 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 CCNE1P24864 410 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 CASP5P51878 434 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 AMPD3Q01432 767 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 NFE2Q16621 373 aaPredicted RBP12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 STXBP5Q5T5C0 1151 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 LRRTM3Q86VH5 581 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 CSGALNACT2Q8N6G5 542 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 LRRC52Q8N7C0 313 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 PDILTQ8N807 584 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 SUMF1Q8NBK3 374 aa12.99□□□□□ -0.33
PDLIM7-214ENST00000505746 ZBTB44Q8NCP5 570 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms