RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 LCHNA4D1U4 455 aa10□□□□□ -0.81
TPM3-218ENST00000505010 EIF3CLB5ME19 914 aaKnown RBP10□□□□□ -0.81
TPM3-218ENST00000505010 PPEF2O14830 753 aa10□□□□□ -0.81
TPM3-218ENST00000505010 CYP26A1O43174 497 aa10□□□□□ -0.81
TPM3-218ENST00000505010 P4HA1P13674 534 aa10□□□□□ -0.81
TPM3-218ENST00000505010 RAP1GAPP47736 663 aa10□□□□□ -0.81
TPM3-218ENST00000505010 PDE6CP51160 858 aa10□□□□□ -0.81
TPM3-218ENST00000505010 YWHAEP62258 255 aaKnown RBP10□□□□□ -0.81
TPM3-218ENST00000505010 TNNC1P63316 161 aa10□□□□□ -0.81
TPM3-218ENST00000505010 GFPT1Q06210 699 aaPredicted RBP10□□□□□ -0.81
TPM3-218ENST00000505010 SOX4Q06945 474 aaPredicted RBP10□□□□□ -0.81
TPM3-218ENST00000505010 MYO1EQ12965 1108 aa10□□□□□ -0.81
TPM3-218ENST00000505010 ZBTB6Q15916 424 aa10□□□□□ -0.81
TPM3-218ENST00000505010 WDR72Q3MJ13 1102 aa10□□□□□ -0.81
TPM3-218ENST00000505010 C9orf57Q5W0N0 161 aa10□□□□□ -0.81
TPM3-218ENST00000505010 AGMOQ6ZNB7 445 aa10□□□□□ -0.81
TPM3-218ENST00000505010 SLC24A5Q71RS6 500 aa10□□□□□ -0.81
TPM3-218ENST00000505010 ZNF571Q7Z3V5 609 aaPredicted RBP10□□□□□ -0.81
TPM3-218ENST00000505010 KIAA1328Q86T90 577 aa10□□□□□ -0.81
TPM3-218ENST00000505010 RBBP8NLQ8NC74 664 aaPredicted RBP10□□□□□ -0.81
TPM3-218ENST00000505010 DBF4BQ8NFT6 615 aa10□□□□□ -0.81
TPM3-218ENST00000505010 CXorf38Q8TB03 319 aa10□□□□□ -0.81
TPM3-218ENST00000505010 SLC20A1Q8WUM9 679 aa10□□□□□ -0.81
TPM3-218ENST00000505010 APBB2Q92870 758 aa10□□□□□ -0.81
TPM3-218ENST00000505010 JAKMIP2Q96AA8 810 aa10□□□□□ -0.81
TPM3-218ENST00000505010 ZNF560Q96MR9 790 aa10□□□□□ -0.81
TPM3-218ENST00000505010 PPP1R10Q96QC0 940 aaKnown RBP10□□□□□ -0.81
TPM3-218ENST00000505010 EIF3CQ99613 913 aaKnown RBP10□□□□□ -0.81
TPM3-218ENST00000505010 SMYD3Q9H7B4 428 aa10□□□□□ -0.81
TPM3-218ENST00000505010 GOLGA2P5Q9HBQ8 144 aa10□□□□□ -0.81
TPM3-218ENST00000505010 SEPT11Q9NVA2 429 aaKnown RBP10□□□□□ -0.81
TPM3-218ENST00000505010 SLC38A7Q9NVC3 462 aa10□□□□□ -0.81
TPM3-218ENST00000505010 ADGRG1Q9Y653 693 aa10□□□□□ -0.81
TPM3-218ENST00000505010 TRIOO75962 3097 aa10□□□□□ -0.81
TPM3-218ENST00000505010 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
TPM3-218ENST00000505010 C9IYK1 514 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 ZNF500O60304 480 aaPredicted RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 PARNO95453 639 aaKnown RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 STAU1O95793 577 aaKnown RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 POMCP01189 267 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 THP07101 528 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 WEE2P0C1S8 567 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 CYP3A5P20815 502 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 ACO1P21399 889 aaKnown RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 KCNA4P22459 653 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 ANXA13P27216 316 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 KRT83P78385 493 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 CYP27A1Q02318 531 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 GRIK3Q13003 919 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 GPNMBQ14956 572 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 TAF3Q5VWG9 929 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 TMEM270Q6UE05 265 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 GLB1LQ6UWU2 654 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 HFE2Q6ZVN8 426 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 ZNF598Q86UK7 904 aaKnown RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 RTN4RL1Q86UN2 441 aaPredicted RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 SLC47A2Q86VL8 602 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 LRRC52Q8N7C0 313 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 UBR7Q8N806 425 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 URGCPQ8TCY9 931 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 TGS1Q96RS0 853 aaKnown RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 RAD9AQ99638 391 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 UBN1Q9NPG3 1134 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 CISHQ9NSE2 258 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 FAM50BQ9Y247 325 aa9.99□□□□□ -0.81
TPM3-218ENST00000505010 REXO2Q9Y3B8 237 aaKnown RBP9.99□□□□□ -0.81
TPM3-218ENST00000505010 A0A087X0T9 212 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 ANO9A1A5B4 782 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 GOLGA6L9A6NEM1 432 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 ZNF263O14978 683 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 LCA5LO95447 670 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 EOMESO95936 686 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 CALCAP01258 141 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 CXCL10P02778 98 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 FAM228BP0C875 321 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 CYP11B1P15538 503 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 TNFAIP3P21580 790 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 CLCN1P35523 988 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 PNPLA4P41247 253 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 TAF6P49848 677 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 AFF1P51825 1210 aaKnown RBP9.98□□□□□ -0.81
TPM3-218ENST00000505010 ERVK-21P61565 698 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 WDR5P61964 334 aaKnown RBP9.98□□□□□ -0.81
TPM3-218ENST00000505010 FOXK2Q01167 660 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 SLC18A3Q16572 532 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 ASTE1Q2TB18 679 aaPredicted RBP9.98□□□□□ -0.81
TPM3-218ENST00000505010 SV2CQ496J9 727 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 ARHGAP29Q52LW3 1261 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 CLLU1OSQ5K130 101 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 TMCO2Q7Z6W1 182 aaPredicted RBP9.98□□□□□ -0.81
TPM3-218ENST00000505010 NOP9Q86U38 636 aaKnown RBP9.98□□□□□ -0.81
TPM3-218ENST00000505010 GSTCDQ8NEC7 633 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
TPM3-218ENST00000505010 EPS8L1Q8TE68 723 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 MMS19Q96T76 1030 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 PHOX2BQ99453 314 aa9.98□□□□□ -0.81
TPM3-218ENST00000505010 AGPAT1Q99943 283 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms