RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 STKLD1Q8NE28 680 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 OR10Z1Q8NGY1 313 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 RAET1EQ8TD07 263 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HSPBAP1Q96EW2 488 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HES6Q96HZ4 224 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 METTL2AQ96IZ6 378 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CLMNQ96JQ2 1002 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CNOT6LQ96LI5 555 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ELAC2Q9BQ52 826 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 USP29Q9HBJ7 922 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TIMMDC1Q9NPL8 285 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SMYD2Q9NRG4 433 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC38A7Q9NVC3 462 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 GDAQ9Y2T3 454 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ACOT9Q9Y305 439 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 VWA7Q9Y334 891 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FIS1Q9Y3D6 152 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CAPN6Q9Y6Q1 641 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 RP1L1Q8IWN7 2480 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 A6NJR5 290 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SFI1A8K8P3 1242 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CASQ2O14958 399 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FOXN1O15353 648 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PEX1O43933 1283 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PFDN1O60925 122 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CAMTA2O94983 1202 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HOXB3P14651 431 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TCP1P17987 556 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 BMP8BP34820 402 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PSMC2P35998 433 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 EIF4A3P38919 411 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 THOP1P52888 689 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DYNLL1P63167 89 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DYNLT1P63172 113 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ACY1Q03154 408 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PTPN11Q06124 597 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CDK18Q07002 472 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 IFRD2Q12894 506 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DYNC1I2Q13409 638 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 COL9A3Q14050 684 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TMEM259Q4ZIN3 620 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 VWA3BQ502W6 1294 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 APOA5Q6Q788 366 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF704Q6ZNC4 412 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 BMP8AQ7Z5Y6 402 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM186BQ8IYM0 893 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HS6ST3Q8IZP7 471 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 BLIDQ8IZY5 108 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ENDOVQ8N8Q3 282 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC89Q8N998 374 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM133AQ8N9E0 248 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF565Q8N9K5 539 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SCAIQ8N9R8 606 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 OSBP2Q969R2 916 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 MARC2Q969Z3 335 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 LENG1Q96BZ8 264 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF274Q96GC6 653 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 WRNIP1Q96S55 665 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC29A1Q99808 456 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 VCXQ9H320 206 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PCIF1Q9H4Z3 704 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SLITRK6Q9H5Y7 841 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CYLDQ9NQC7 956 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TAS2R7Q9NYW3 318 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ITGB1BP2Q9UKP3 347 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FNDC3AQ9Y2H6 1198 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PPP2R3BQ9Y5P8 575 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HEMK1Q9Y5R4 338 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ABCC4O15439 1325 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 MYH9P35579 1960 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIM49BA6NDI0 452 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SRRM3A6NNA2 597 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TEX33O43247 280 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SCO2O43819 266 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CRCPO75575 148 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 VNN1O95497 513 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ACSL3O95573 720 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PDHA1P08559 390 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ETS2P15036 469 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NQO1P15559 274 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ADCY7P51828 1080 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CTSWP56202 376 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GTF2IP78347 998 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 IL1RL1Q01638 556 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 KIF23Q02241 960 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 WDR72Q3MJ13 1102 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FUT11Q495W5 492 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM26FQ5R3K3 315 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TTBK2Q6IQ55 1244 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DPP8Q6V1X1 898 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HTR3DQ70Z44 454 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TNS4Q8IZW8 715 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PIP4K2CQ8TBX8 421 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 COG1Q8WTW3 980 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CELF1Q92879 486 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FATE1Q969F0 183 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ANKRD27Q96NW4 1050 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ANO3Q9BYT9 981 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PUS7LQ9H0K6 701 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LHX5Q9H2C1 402 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms