RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	PPCS	Q9HAB8	311 aa		18.8	■□□□□ 0.6
POLR2J3-209	ENST00000504157	NOCT	Q9UK39	431 aa	Known RBP	18.8	■□□□□ 0.6
POLR2J3-209	ENST00000504157	MTO1	Q9Y2Z2	717 aa	Known RBP	18.8	■□□□□ 0.6
POLR2J3-209	ENST00000504157	EXOC1L	A0A1B0GW35	172 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	FAM13A	O94988	1023 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	XIAP	P98170	497 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	C6orf163	Q5TEZ5	329 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	TMPRSS6	Q8IU80	811 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	LENG9	Q96B70	501 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	C9orf72	Q96LT7	481 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	PANX3	Q96QZ0	392 aa		18.79	■□□□□ 0.6
POLR2J3-209	ENST00000504157	BIRC5	O15392	142 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	BAG2	O95816	211 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	RPL5	P46777	297 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	VPS41	P49754	854 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	OXCT1	P55809	520 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ARHGAP4	P98171	946 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	TBL3	Q12788	808 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	PKN2	Q16513	984 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	LVRN	Q6Q4G3	990 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	RAPH1	Q70E73	1250 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	EPS8L1	Q8TE68	723 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SNRNP27	Q8WVK2	155 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	PRR11	Q96HE9	360 aa	Predicted RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CFAP57	Q96MR6	1250 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	FIZ1	Q96SL8	496 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	TTC1	Q99614	292 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CORO1B	Q9BR76	489 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SSU72	Q9NP77	194 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ARHGEF4	Q9NR80	690 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CHST7	Q9NS84	486 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	PPM1H	Q9ULR3	514 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157		A0A0G2JND7	137 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L15	C9J2P7	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L13	C9JLJ4	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L11	C9JVI0	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L18	D6R9N7	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L22	D6RA61	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L17	D6RBQ6	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L19	D6RCP7	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L20	D6RJB6	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	FKBP6	O75344	327 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CIB2	O75838	187 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CPA3	P15088	417 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	NMT1	P30419	496 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ADCY8	P40145	1251 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	GALK1	P51570	392 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CHN2	P52757	468 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ARFIP2	P53365	341 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	RHBDL3	P58872	404 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ZBTB16	Q05516	673 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	GABPA	Q06546	454 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L24	Q0WX57	530 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SH3D19	Q5HYK7	790 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	C1orf228	Q6PIY5	440 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L6P	Q6QN14	398 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	RBM44	Q6ZP01	1051 aa	Known RBP	18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	RFX8	Q6ZV50	586 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ZBED8	Q8IZ13	594 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	C4orf33	Q8N1A6	199 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CCDC89	Q8N998	374 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	VAV3	Q9UKW4	847 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SSX2IP	Q9Y2D8	614 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	COL24A1	Q17RW2	1714 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ZNF536	O15090	1300 aa		18.78	■□□□□ 0.6
POLR2J3-209	ENST00000504157	USP17L10	C9JJH3	530 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SMIM18	P0DKX4	95 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	VCL	P18206	1134 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	KRT15	P19012	456 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	SERPINB8	P50452	374 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ADRM1	Q16186	407 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	KLHDC10	Q6PID8	442 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ANKS1B	Q7Z6G8	1248 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	CPNE8	Q86YQ8	564 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ZNF276	Q8N554	614 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	ZCCHC9	Q8N567	271 aa	Known RBP	18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	TMEM174	Q8WUU8	243 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	UIMC1	Q96RL1	719 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	NYX	Q9GZU5	481 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	BRD8	Q9H0E9	1235 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	BCAS3	Q9H6U6	928 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	PARVG	Q9HBI0	331 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	FBXO6	Q9NRD1	293 aa	Predicted RBP	18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	LRRC4B	Q9NT99	713 aa		18.77	■□□□□ 0.6
POLR2J3-209	ENST00000504157	TM7SF2	O76062	418 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	CETN1	Q12798	172 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	COG2	Q14746	738 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	EPC2	Q52LR7	807 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	CCDC92	Q53HC0	331 aa	Predicted RBP	18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	PRR16	Q569H4	304 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	TTBK2	Q6IQ55	1244 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	AAGAB	Q6PD74	315 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	UGT2A3	Q6UWM9	527 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	C15orf52	Q6ZUT6	534 aa	Known RBP	18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	C1orf186	Q6ZWK4	172 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	ZNF720	Q7Z2F6	126 aa		18.77	■□□□□ 0.59
POLR2J3-209	ENST00000504157	FAM71A	Q8IYT1	594 aa		18.77	■□□□□ 0.59

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