RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CYP11A1P05108 521 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 TMEM191BP0C7N4 346 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 ZSCAN22P10073 491 aaPredicted RBP23.78■■□□□ 1.4
LSM6-203ENST00000503982 CD72P21854 359 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 POLR2BP30876 1174 aaKnown RBP23.78■■□□□ 1.4
LSM6-203ENST00000503982 PNPLA4P41247 253 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 BFSP1Q12934 665 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 WSCD1Q658N2 575 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 ITIH5Q86UX2 942 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 TTC9BQ8N6N2 239 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 OR10T2Q8NGX3 314 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 SHKBP1Q8TBC3 707 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 SMARCD2Q92925 531 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 ZSWIM3Q96MP5 696 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 ASB16Q96NS5 453 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 CUEDC2Q9H467 287 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 HEBP1Q9NRV9 189 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 TICRRQ7Z2Z1 1910 aa23.78■■□□□ 1.4
LSM6-203ENST00000503982 FAM170BA6NMN3 283 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 EXTL3O43909 919 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 F13A1P00488 732 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 GDI1P31150 447 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 VIPR2P41587 438 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 POTEHQ6S545 545 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 YAF2Q8IY57 180 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 DCP1BQ8IZD4 617 aaKnown RBP23.77■■□□□ 1.4
LSM6-203ENST00000503982 GPD1LQ8N335 351 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 CSGALNACT2Q8N6G5 542 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 KCNG4Q8TDN1 519 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 HPS3Q969F9 1004 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 GCNAQ96QF7 691 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 GPR88Q9GZN0 384 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 ZCWPW1Q9H0M4 648 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 DNAJC25Q9H1X3 360 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 ATXN3LQ9H3M9 355 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 SPATA6Q9NWH7 488 aaPredicted RBP23.77■■□□□ 1.4
LSM6-203ENST00000503982 FAM13BQ9NYF5 915 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 ASB3Q9Y575 518 aa23.77■■□□□ 1.4
LSM6-203ENST00000503982 NRG2O14511 850 aaPredicted RBP23.76■■□□□ 1.39
LSM6-203ENST00000503982 MOSPD3O75425 235 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 FCARP24071 287 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 ME1P48163 572 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 TUFMP49411 452 aaKnown RBP23.76■■□□□ 1.39
LSM6-203ENST00000503982 ARHGAP15Q53QZ3 475 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 ZNF852Q6ZMS4 543 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 ASCL5Q7RTU5 278 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 ANKRD36BP1Q96IX9 119 aa23.76■■□□□ 1.39
LSM6-203ENST00000503982 ABI2Q9NYB9 513 aaPredicted RBP23.76■■□□□ 1.39
LSM6-203ENST00000503982 MRPS17Q9Y2R5 130 aaKnown RBP23.76■■□□□ 1.39
LSM6-203ENST00000503982 ZNF638Q14966 1978 aaKnown RBP23.75■■□□□ 1.39
LSM6-203ENST00000503982 PROB1E7EW31 1015 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 DPYSL4O14531 572 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 NCAM2O15394 837 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 HUS1O60921 280 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 GABRR2P28476 465 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 EPHA5P54756 1037 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 WNT7BP56706 349 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 TSPY1Q01534 308 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 VITQ6UXI7 678 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 DNAJB7Q7Z6W7 309 aaPredicted RBP23.75■■□□□ 1.39
LSM6-203ENST00000503982 GPIHBP1Q8IV16 184 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 C1orf210Q8IVY1 113 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 GIPC2Q8TF65 315 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 DEPDC1BQ8WUY9 529 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 IRF7Q92985 503 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 PSMG2Q969U7 264 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 LPIN3Q9BQK8 851 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 TRIM9Q9C026 710 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 PDE11AQ9HCR9 933 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 LTB4R2Q9NPC1 389 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 KBTBD4Q9NVX7 518 aa23.75■■□□□ 1.39
LSM6-203ENST00000503982 MTF2Q9Y483 593 aaPredicted RBP23.75■■□□□ 1.39
LSM6-203ENST00000503982 ZFHX2Q9C0A1 2572 aaPredicted RBP23.75■■□□□ 1.39
LSM6-203ENST00000503982 PRR23AA6NEV1 266 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 ZNF263O14978 683 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 POLR2DO15514 142 aaKnown RBP23.74■■□□□ 1.39
LSM6-203ENST00000503982 FGF19O95750 216 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 TNNC2P02585 160 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 PSMC3P17980 439 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 LMBRD2Q68DH5 695 aaPredicted RBP23.74■■□□□ 1.39
LSM6-203ENST00000503982 SHC4Q6S5L8 630 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 TMC8Q8IU68 726 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 C1orf127Q8N9H9 656 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 GLIS3Q8NEA6 775 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 SPPL2BQ8TCT7 592 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 DNASE1L2Q92874 299 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 ITGA11Q9UKX5 1188 aa23.74■■□□□ 1.39
LSM6-203ENST00000503982 NDRG2Q9UN36 371 aaKnown RBP23.74■■□□□ 1.39
LSM6-203ENST00000503982 NUP210Q8TEM1 1887 aaPredicted RBP23.73■■□□□ 1.39
LSM6-203ENST00000503982 ZNF233A6NK53 670 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 HEPACAM2A8MVW5 462 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 KIAA0391O15091 583 aaKnown RBP23.73■■□□□ 1.39
LSM6-203ENST00000503982 LAMTOR5O43504 91 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 GLULP15104 373 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 RBP5P82980 135 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 MYL7Q01449 175 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 SMARCB1Q12824 385 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 E2F4Q16254 413 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 FAM26FQ5R3K3 315 aa23.73■■□□□ 1.39
LSM6-203ENST00000503982 GPR158Q5T848 1215 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms