RNA–Protein interactions for RNA: ENST00000503972.5

YIPF3-212, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-212ENST00000503972 SF3B1O75533 1304 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■■■ 113.6
YIPF3-212ENST00000503972 GABRDO14764 452 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 SERPING1P05155 500 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 SKILP12757 684 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 TYMPP19971 482 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 GNL1P36915 607 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-212ENST00000503972 RABGGTBP53611 331 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 BPIFB4P59827 614 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 CDK17Q00537 523 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 ELAVL2Q12926 359 aaKnown RBP16.51■□□□□ 0.23
YIPF3-212ENST00000503972 ZNF394Q53GI3 561 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 HGSNATQ68CP4 663 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 FUT10Q6P4F1 479 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 OSTM1Q86WC4 334 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 TMEM139Q8IV31 216 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 CLP1Q92989 425 aaKnown RBP16.51■□□□□ 0.23
YIPF3-212ENST00000503972 IGSF21Q96ID5 467 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-212ENST00000503972 GPR62Q9BZJ7 368 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 SNX25Q9H3E2 840 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 HMGXB4Q9UGU5 601 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 NME7Q9Y5B8 376 aa16.51■□□□□ 0.23
YIPF3-212ENST00000503972 TIMM13Q9Y5L4 95 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-212ENST00000503972 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 GRXCR1A8MXD5 290 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 A8MXQ7 604 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 SYN3O14994 580 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 EFEMP2O95967 443 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 BMP8BP34820 402 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 DEKP35659 375 aaKnown RBP16.5■□□□□ 0.23
YIPF3-212ENST00000503972 LHX1P48742 406 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 RAD23BP54727 409 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 PTK2Q05397 1052 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 FAM109BQ6ICB4 259 aaPredicted RBP16.5■□□□□ 0.23
YIPF3-212ENST00000503972 SLC47A2Q86VL8 602 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 METTL23Q86XA0 190 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 SLC4A11Q8NBS3 891 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 TMEM176AQ96HP8 235 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 CHP1Q99653 195 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 ACP6Q9NPH0 428 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 ARHGAP20Q9P2F6 1191 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 STXBP5LQ9Y2K9 1186 aa16.5■□□□□ 0.23
YIPF3-212ENST00000503972 BZW2Q9Y6E2 419 aaKnown RBP16.5■□□□□ 0.23
YIPF3-212ENST00000503972 PAEPP09466 180 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 CYP11B1P15538 503 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 FGFR3P22607 806 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 LMO2P25791 158 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 TKTP29401 623 aaKnown RBP16.49■□□□□ 0.23
YIPF3-212ENST00000503972 PPM1AP35813 382 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 CCZ1BP86790 482 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 CCZ1P86791 482 aaPredicted RBP16.49■□□□□ 0.23
YIPF3-212ENST00000503972 FAM171A1Q5VUB5 890 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.49■□□□□ 0.23
YIPF3-212ENST00000503972 TMTC1Q8IUR5 882 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 RNF168Q8IYW5 571 aaPredicted RBP16.49■□□□□ 0.23
YIPF3-212ENST00000503972 EPS8L1Q8TE68 723 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 DDX43Q9NXZ2 648 aaKnown RBP16.49■□□□□ 0.23
YIPF3-212ENST00000503972 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
YIPF3-212ENST00000503972 SSU72P8A0A1W2PR75 194 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 HCRTO43612 131 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 CAPN15O75808 1086 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 CALCAP01258 141 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 PLEKP08567 350 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 PDGFRBP09619 1106 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 GNA15P30679 374 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 PDE6CP51160 858 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 YWHAHQ04917 246 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 ORC1Q13415 861 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 OVOS1Q6IE37 1185 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 ZNF571Q7Z3V5 609 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 NOP9Q86U38 636 aaKnown RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 CRYBG2Q8N1P7 616 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 TMEM169Q96HH4 297 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 ZNF830Q96NB3 372 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 KCNF1Q9H3M0 494 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 NHEJ1Q9H9Q4 299 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 NOCTQ9UK39 431 aaKnown RBP16.48■□□□□ 0.23
YIPF3-212ENST00000503972 KIAA1257Q9ULG3 409 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 PCDHA11Q9Y5I1 949 aa16.48■□□□□ 0.23
YIPF3-212ENST00000503972 KIAA1671Q9BY89 1806 aa16.47■□□□□ 0.23
YIPF3-212ENST00000503972 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-212ENST00000503972 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
YIPF3-212ENST00000503972 LINC01553A4QN01 128 aa16.47■□□□□ 0.23
YIPF3-212ENST00000503972 NRDCO43847 1150 aa16.47■□□□□ 0.23
YIPF3-212ENST00000503972 OAZ2O95190 189 aa16.47■□□□□ 0.23
YIPF3-212ENST00000503972 VDRP11473 427 aa16.47■□□□□ 0.23
YIPF3-212ENST00000503972 MYOGP15173 224 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms