RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 KANSL1LA0AUZ9 987 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
MED28-203ENST00000503945 FAM170BA6NMN3 283 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 NCAM2O15394 837 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 EXTL3O43909 919 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 CYP11A1P05108 521 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 CEBPBP17676 345 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 CD72P21854 359 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 ME1P48163 572 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 CASP5P51878 434 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 MLF2Q15773 248 aaPredicted RBP12.9□□□□□ -0.34
MED28-203ENST00000503945 TAF12Q16514 161 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 SV2CQ496J9 727 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 ZC3H14Q6PJT7 736 aaKnown RBP12.9□□□□□ -0.34
MED28-203ENST00000503945 ITIH5Q86UX2 942 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.34
MED28-203ENST00000503945 SUMF1Q8NBK3 374 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 FAM200AQ8TCP9 573 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 SAAL1Q96ER3 474 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 ZSWIM3Q96MP5 696 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 DDX23Q9BUQ8 820 aaKnown RBP12.9□□□□□ -0.34
MED28-203ENST00000503945 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 PCIF1Q9H4Z3 704 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
MED28-203ENST00000503945 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
MED28-203ENST00000503945 FRYLO94915 3013 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 ZNF233A6NK53 670 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
MED28-203ENST00000503945 FGF19O95750 216 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 F13A1P00488 732 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 PSMC3P17980 439 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 CCR2P41597 374 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 EPHA5P54756 1037 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 ASIC1P78348 528 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 RBP5P82980 135 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 SURF1Q15526 300 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 SLC39A12Q504Y0 691 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 POTEHQ6S545 545 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 SHC4Q6S5L8 630 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 ZNF852Q6ZMS4 543 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 GPD1LQ8N335 351 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 C2orf15Q8WU43 125 aaKnown RBP12.89□□□□□ -0.35
MED28-203ENST00000503945 RUBCNQ92622 972 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 IRF7Q92985 503 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 BORCS6Q96GS4 357 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 ZNF560Q96MR9 790 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 ASB16Q96NS5 453 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 HINFPQ9BQA5 517 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 SLITRK6Q9H5Y7 841 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 BRD9Q9H8M2 597 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 KIAA1586Q9HCI6 787 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 SPATA6Q9NWH7 488 aaPredicted RBP12.89□□□□□ -0.35
MED28-203ENST00000503945 MRPS17Q9Y2R5 130 aaKnown RBP12.89□□□□□ -0.35
MED28-203ENST00000503945 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 CACNA1AO00555 2505 aa12.89□□□□□ -0.35
MED28-203ENST00000503945 MTMR11A4FU01 709 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 HUS1O60921 280 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 VNN2O95498 520 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 KRT19P08727 400 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 GJA1P17302 382 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 CSTF1Q05048 431 aaKnown RBP12.88□□□□□ -0.35
MED28-203ENST00000503945 UBXN2BQ14CS0 331 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 TEAD2Q15562 447 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 E2F4Q16254 413 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 MGAT5BQ3V5L5 792 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
MED28-203ENST00000503945 ZNF507Q8TCN5 953 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 PSMG2Q969U7 264 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 TMEM209Q96SK2 561 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
MED28-203ENST00000503945 OSBPL6Q9BZF3 934 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 ATXN3LQ9H3M9 355 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 MAGEF1Q9HAY2 307 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
MED28-203ENST00000503945 A0A1W2PRU2 124 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 MAN2B1O00754 1011 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 ZNF263O14978 683 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 LAMTOR5O43504 91 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
MED28-203ENST00000503945 MOSPD3O75425 235 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms