RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 TCHPQ9BT92 498 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 POLR3CQ9BUI4 534 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 MRPL4Q9BYD3 311 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 EBF3Q9H4W6 596 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 HPS4Q9NQG7 708 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 TIMM13Q9Y5L4 95 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 PCNX2A6NKB5 2137 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 PHLPP2Q6ZVD8 1323 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 DSPP15924 2871 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 MCF2P10911 925 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 CDC25CP30307 473 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 GALK1P51570 392 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 IRX4P78413 519 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 DMC1Q14565 340 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 USP39Q53GS9 565 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 ZSWIM6Q9HCJ5 1215 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 ZMYM5Q9UJ78 669 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 KLK13Q9UKR3 277 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
PDLIM7-210ENST00000503827 NBEAQ8NFP9 2946 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 MTMR11A4FU01 709 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 PATE3B3GLJ2 98 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 LMAN2Q12907 356 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 MYBPC2Q14324 1141 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 VEPH1Q14D04 833 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 TRIM68Q6AZZ1 485 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 ATAD1Q8NBU5 361 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 ERMNQ8TAM6 284 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 CHFRQ96EP1 664 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 P2RY13Q9BPV8 354 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 SLC46A2Q9BY10 475 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 FBRSL1Q9HCM7 1045 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 HSFX1Q9UBD0 423 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 INVSQ9Y283 1065 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 WDFY3Q8IZQ1 3526 aa17.23■□□□□ 0.35
PDLIM7-210ENST00000503827 OTOL1A6NHN0 477 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 CCDC169A6NNP5 214 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 MEFVO15553 781 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 SOAT2O75908 522 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 HARSP12081 509 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 RPA1P27694 616 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 ARMCX5Q6P1M9 558 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 MPZL3Q6UWV2 235 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 DSTYKQ6XUX3 929 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 CMTM8Q8IZV2 173 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 TTC9BQ8N6N2 239 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 WASF1Q92558 559 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 TARS2Q9BW92 718 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 TMEM134Q9H6X4 195 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 DMXL2Q8TDJ6 3036 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 ANK1P16157 1881 aa17.22■□□□□ 0.35
PDLIM7-210ENST00000503827 OBSL1O75147 1896 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 PROZP22891 400 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 AVPR1AP37288 418 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 DHPSP49366 369 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 TUFMP49411 452 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 SCRN1Q12765 414 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 BFSP1Q12934 665 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 PSMD2Q13200 908 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 TAF12Q16514 161 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 SLC10A6Q3KNW5 377 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 SOWAHCQ53LP3 525 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 OVOS1Q6IE37 1185 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 PROSER1Q86XN7 944 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 TSTD1Q8NFU3 115 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 PIGKQ92643 395 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 LPIN3Q9BQK8 851 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 NUSAP1Q9BXS6 441 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 TPSD1Q9BZJ3 242 aa17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 EVLQ9UI08 416 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 TNRC6BQ9UPQ9 1833 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-210ENST00000503827 PI4KAP42356 2102 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 H0Y626 953 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 WNT7AO00755 349 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 TRIM16O95361 564 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 ARSAP15289 507 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 LRPAP1P30533 357 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 PEX3P56589 373 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 SIM1P81133 766 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 TRIM61Q5EBN2 209 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 CCDC26Q8TAB7 109 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 SEPT5Q99719 369 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 TMEM60Q9H2L4 133 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 KIF9Q9HAQ2 790 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 IL21Q9HBE4 155 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 TDP1Q9NUW8 608 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 ORC3Q9UBD5 711 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 TBX20Q9UMR3 447 aa17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-210ENST00000503827 PTPRDP23468 1912 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 LARGE1O95461 756 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms