RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DPP7Q9UHL4 492 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 TACC1O75410 805 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 CCDC192P0DO97 292 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 PIK3CAP42336 1068 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 TYRO3Q06418 890 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 TPGS2Q68CL5 300 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 ADGRF2Q8IZF7 708 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 KREMEN2Q8NCW0 462 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 ATXN2LQ8WWM7 1075 aaKnown RBP26.94■■□□□ 1.9
LSM6-202ENST00000502781 S1PR5Q9H228 398 aa26.94■■□□□ 1.9
LSM6-202ENST00000502781 LETM1O95202 739 aaPredicted RBP26.93■■□□□ 1.9
LSM6-202ENST00000502781 SPATA31D3P0C874 917 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 GPR17Q13304 367 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 ZNF667Q5HYK9 610 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 SPATA31D4Q6ZUB0 917 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 OSTM1Q86WC4 334 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 THEM5Q8N1Q8 247 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 FBXL13Q8NEE6 735 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.93■■□□□ 1.9
LSM6-202ENST00000502781 CNOT6LQ96LI5 555 aaKnown RBP26.93■■□□□ 1.9
LSM6-202ENST00000502781 CD207Q9UJ71 328 aa26.93■■□□□ 1.9
LSM6-202ENST00000502781 PLXNA3P51805 1871 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 LRRN2O75325 713 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 ATF2P15336 505 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 WARSP23381 471 aaKnown RBP26.92■■□□□ 1.9
LSM6-202ENST00000502781 LHX1P48742 406 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 FMO5P49326 533 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 TNNC1P63316 161 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 SEMA4DQ92854 862 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 ELMO3Q96BJ8 720 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 TMEM209Q96SK2 561 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 MMS19Q96T76 1030 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 ACBD6Q9BR61 282 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 FUCA2Q9BTY2 467 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 ZCWPW1Q9H0M4 648 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 RAB20Q9NX57 234 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 NXF1Q9UBU9 619 aaKnown RBP26.92■■□□□ 1.9
LSM6-202ENST00000502781 AFF4Q9UHB7 1163 aaKnown RBP26.92■■□□□ 1.9
LSM6-202ENST00000502781 MAFFQ9ULX9 164 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 XIRP2A4UGR9 3374 aa26.92■■□□□ 1.9
LSM6-202ENST00000502781 ARPP19P56211 112 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 NFKBIBQ15653 356 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 TPD52L1Q16890 204 aaPredicted RBP26.91■■□□□ 1.9
LSM6-202ENST00000502781 AAK1Q2M2I8 961 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 ELMSAN1Q6PJG2 1045 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 RTL10Q7L3V2 364 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 CMASQ8NFW8 434 aaPredicted RBP26.91■■□□□ 1.9
LSM6-202ENST00000502781 PI4K2AQ9BTU6 479 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 SFXN1Q9H9B4 322 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 APOBEC3GQ9HC16 384 aaKnown RBP26.91■■□□□ 1.9
LSM6-202ENST00000502781 DDX43Q9NXZ2 648 aaKnown RBP26.91■■□□□ 1.9
LSM6-202ENST00000502781 POLIQ9UNA4 740 aa26.91■■□□□ 1.9
LSM6-202ENST00000502781 P4HA2O15460 535 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 ZMYND10O75800 440 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 VNN2O95498 520 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 OR4Q2P0C623 313 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 CPB1P15086 417 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 NOP14P78316 857 aaKnown RBP26.9■■□□□ 1.9
LSM6-202ENST00000502781 MRPS5P82675 430 aaKnown RBP26.9■■□□□ 1.9
LSM6-202ENST00000502781 UVSSAQ2YD98 709 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 SPOPLQ6IQ16 392 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.9■■□□□ 1.9
LSM6-202ENST00000502781 RHOBTB2Q9BYZ6 727 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 IMPG2Q9BZV3 1241 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 DNAJC25Q9H1X3 360 aa26.9■■□□□ 1.9
LSM6-202ENST00000502781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.9■■□□□ 1.9
LSM6-202ENST00000502781 N4BP1O75113 896 aaKnown RBP26.89■■□□□ 1.9
LSM6-202ENST00000502781 ASPAP45381 313 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 MYL7Q01449 175 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 ITIH3Q06033 890 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 KCNH2Q12809 1159 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 SMAD4Q13485 552 aaKnown RBP26.89■■□□□ 1.9
LSM6-202ENST00000502781 CLUL1Q15846 466 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 RNF19BQ6ZMZ0 732 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 LRRTM3Q86VH5 581 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 TCEAL8Q8IYN2 117 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 C12orf76Q8N812 135 aaPredicted RBP26.89■■□□□ 1.9
LSM6-202ENST00000502781 FAXDC2Q96IV6 333 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 PKMYT1Q99640 499 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 MRPL45Q9BRJ2 306 aaKnown RBP26.89■■□□□ 1.9
LSM6-202ENST00000502781 ADAM7Q9H2U9 754 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 SAMSN1Q9NSI8 373 aaKnown RBP26.89■■□□□ 1.9
LSM6-202ENST00000502781 ZDHHC7Q9NXF8 308 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 NFE2L3Q9Y4A8 694 aa26.89■■□□□ 1.9
LSM6-202ENST00000502781 MBTPS2O43462 519 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 P4HA1P13674 534 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 PUS10Q3MIT2 529 aaKnown RBP26.88■■□□□ 1.89
LSM6-202ENST00000502781 FAM114A1Q8IWE2 563 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 SUSD6Q92537 303 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 ASB2Q96Q27 587 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 BCO2Q9BYV7 579 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 SMYD3Q9H7B4 428 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 NME7Q9Y5B8 376 aa26.88■■□□□ 1.89
LSM6-202ENST00000502781 MTCL1Q9Y4B5 1905 aaKnown RBP26.88■■□□□ 1.89
LSM6-202ENST00000502781 GRXCR2A6NFK2 248 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 HCRTO43612 131 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 RFPL2O75678 378 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 SEC24AO95486 1093 aa26.87■■□□□ 1.89
LSM6-202ENST00000502781 AFPP02771 609 aaKnown RBP26.87■■□□□ 1.89
LSM6-202ENST00000502781 C8AP07357 584 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms